RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 RPS6KC1Q96S38 1066 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ACTR5Q9H9F9 607 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SAYSD1Q9NPB0 183 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 UVRAGQ9P2Y5 699 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PIAS1O75925 651 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 CCNE2O96020 404 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 HLA-DRAP01903 254 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SRGAP2CP0DJJ0 459 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ADSSP30520 456 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 GNA15P30679 374 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 JAK3P52333 1124 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PGM5Q15124 567 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SPRED3Q2MJR0 410 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ZDHHC14Q8IZN3 488 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 MSTO1Q9BUK6 570 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 NXF1Q9UBU9 619 aaKnown RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 LRRD1A4D1F6 860 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 AGTP01019 485 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 GZMAP12544 262 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 RARGP13631 454 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ATP13A4Q4VNC1 1196 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 IZUMO3Q5VZ72 239 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ANO5Q75V66 913 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 CDR2LQ86X02 465 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PARP9Q8IXQ6 854 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 TMEM161BQ8NDZ6 487 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 BSNDQ8WZ55 320 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PPP1R16BQ96T49 567 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 ZDHHC18Q9NUE0 388 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 RBAKQ9NYW8 714 aaPredicted RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
ACTN1-203ENST00000394419 PCDHA3Q9Y5H8 950 aa11.23□□□□□ -0.61
ACTN1-203ENST00000394419 RPTORQ8N122 1335 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 EXOC1LA0A1B0GW35 172 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CCT8L1PA6NM43 557 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 RASA4BC9J798 803 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SGK1O00141 431 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 O00370 1275 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 WNT10BO00744 389 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 RASA4O43374 803 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 KRT1P04264 644 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ATP5DP30049 168 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CCND2P30279 289 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 GBP1P32455 592 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 TFAMQ00059 246 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 PRKCEQ02156 737 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 TRPC3Q13507 836 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ANKRD20A8PQ5CZ79 823 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 FAM182AQ5T1J6 154 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CYB5D1Q6P9G0 228 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 KCNV1Q6PIU1 500 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 VSIG1Q86XK7 387 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ANKRD35Q8N283 1001 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 GRK7Q8WTQ7 553 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SNF8Q96H20 258 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 RIPK3Q9Y572 518 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 P4HA2O15460 535 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 DRD4P21917 467 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 GTF2BQ00403 316 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ERMARDQ5T6L9 678 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CROCCP2Q86T23 111 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 KCTD17Q8N5Z5 321 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SHC3Q92529 594 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 KLHL29Q96CT2 875 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 MOV10L1Q9BXT6 1211 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 PDGFDQ9GZP0 370 aaPredicted RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 MTFR1LQ9H019 292 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 R3HDM2Q9Y2K5 976 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CHUKO15111 745 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SUN1O94901 812 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 FSBPO95073 299 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 PSAPP07602 524 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 PTGIRP43119 386 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 CYP24A1Q07973 514 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 AUHQ13825 339 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 P3H1Q32P28 736 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 SPDYE2Q495Y8 402 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 OSBPL8Q9BZF1 889 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 ZWILCHQ9H900 591 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 NOCTQ9UK39 431 aaKnown RBP11.22□□□□□ -0.61
ACTN1-203ENST00000394419 TELO2Q9Y4R8 837 aa11.22□□□□□ -0.61
ACTN1-203ENST00000394419 WDR46O15213 610 aaKnown RBP11.21□□□□□ -0.61
ACTN1-203ENST00000394419 DHX15O43143 795 aaKnown RBP11.21□□□□□ -0.61
ACTN1-203ENST00000394419 GGPS1O95749 300 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 ZSCAN5DPP0CG00 497 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 PEX5P50542 639 aa11.21□□□□□ -0.61
ACTN1-203ENST00000394419 POU5F1Q01860 360 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms