RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 TARS2Q9BW92 718 aaKnown RBP6.4□□□□□ -1.39
CASC3-202ENST00000394114 SPATA9Q9BWV2 254 aa6.4□□□□□ -1.39
CASC3-202ENST00000394114 NIFKQ9BYG3 293 aaKnown RBP6.4□□□□□ -1.39
CASC3-202ENST00000394114 NDST4Q9H3R1 872 aa6.4□□□□□ -1.39
CASC3-202ENST00000394114 PDGFCQ9NRA1 345 aa6.4□□□□□ -1.39
CASC3-202ENST00000394114 PLXNA1Q9UIW2 1896 aa6.4□□□□□ -1.39
CASC3-202ENST00000394114 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TTC26A0AVF1 554 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 FAM221AA4D161 298 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MFAP3LO75121 409 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 KIF20AO95235 890 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 GGPS1O95749 300 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 F2P00734 622 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TRIM21P19474 475 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 MUTP22033 750 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 GUCY2CP25092 1073 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CASP4P49662 377 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 DNM2P50570 870 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 PEX3P56589 373 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CENPCQ03188 943 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 GFOD2Q3B7J2 385 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 VWA3BQ502W6 1294 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 GJC2Q5T442 439 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 ABHD15Q6UXT9 468 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TMEM139Q8IV31 216 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 SYCP3Q8IZU3 236 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 COPS5Q92905 334 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 FIZ1Q96SL8 496 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CRACR2AQ9BSW2 395 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MROH8Q9H579 483 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 OLFML3Q9NRN5 406 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 FAM207AQ9NSI2 230 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 SPTLC3Q9NUV7 552 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 PLXNB2O15031 1838 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 ARID2Q68CP9 1835 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 ZMYM2Q9UBW7 1377 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CCDC169A6NNP5 214 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CETN3O15182 167 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 SLC16A4O15374 487 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TGFB1I1O43294 461 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 STAM2O75886 525 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 FGFR1OPO95684 399 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 ITGBL1O95965 494 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 NR3C1P04150 777 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TPM1P09493 284 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 EDNRBP24530 442 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MARK3P27448 753 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 KRT9P35527 623 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CYP2J2P51589 502 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 ZNF157P51786 506 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 ZNF131P52739 623 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 PURAQ00577 322 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 APBA1Q02410 837 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 PPP2R5EQ16537 467 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MAN2A1Q16706 1144 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 DCAF17Q5H9S7 520 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 FKBP15Q5T1M5 1219 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TCERG1LQ5VWI1 586 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MIS18BP1Q6P0N0 1132 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 TOGARAM2Q6ZUX3 1019 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 ZNF720Q7Z2F6 126 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 SMAP1Q8IYB5 467 aaPredicted RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 CCAR2Q8N163 923 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 ATP6V0A1Q93050 837 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 SUSD3Q96L08 255 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 CEP44Q9C0F1 390 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MMRN2Q9H8L6 949 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 PPCSQ9HAB8 311 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 MLXIPQ9HAP2 919 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 LATS2Q9NRM7 1088 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 LARSQ9P2J5 1176 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 DBR1Q9UK59 544 aaKnown RBP6.39□□□□□ -1.39
CASC3-202ENST00000394114 ODF2LQ9ULJ1 636 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 LZTS1Q9Y250 596 aa6.39□□□□□ -1.39
CASC3-202ENST00000394114 LRRC37A2A6NM11 1700 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 SYNGAP1Q96PV0 1343 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 ENC1O14682 589 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 EPHB6O15197 1021 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 OFD1O75665 1012 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 RFPL1O75677 317 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 AKAP3O75969 853 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 FARP2O94887 1054 aaPredicted RBP6.38□□□□□ -1.39
CASC3-202ENST00000394114 LYPLA2O95372 231 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 SUPT20HL2P0C7V6 817 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 CPEP16870 476 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 ADORA2AP29274 412 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 FKBP1BP68106 108 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 HSDL1Q3SXM5 330 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 CCDC116Q8IYX3 515 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 CCDC112Q8NEF3 446 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 PCIF1Q9H4Z3 704 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 ZNF302Q9NR11 478 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 AGPAT5Q9NUQ2 364 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 DZANK1Q9NVP4 752 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 ABI2Q9NYB9 513 aaPredicted RBP6.38□□□□□ -1.39
CASC3-202ENST00000394114 KCND2Q9NZV8 630 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 CPA4Q9UI42 421 aa6.38□□□□□ -1.39
CASC3-202ENST00000394114 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms