RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 CST5P28325 142 aaPredicted RBP18.86■□□□□ 0.61
MBD4-202ENST00000393278 NBPF20Q3BBV1 942 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 TAF2Q6P1X5 1199 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 TMEM192Q8IY95 271 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 FAM71AQ8IYT1 594 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 NME8Q8N427 588 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 OLIG1Q8TAK6 271 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 GTF2IRD1Q9UHL9 959 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 NENFQ9UMX5 172 aa18.86■□□□□ 0.61
MBD4-202ENST00000393278 TRIP12Q14669 1992 aaPredicted RBP18.86■□□□□ 0.61
MBD4-202ENST00000393278 DDX3XO00571 662 aaKnown RBP eCLIP18.85■□□□□ 0.613e-6■■□□□ 14.5
MBD4-202ENST00000393278 RIOK3O14730 519 aaKnown RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 EIF4BP23588 611 aaKnown RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 NCOA4Q13772 614 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 DUOXA2Q1HG44 320 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 C10orf76Q5T2E6 689 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 CCSAPQ6IQ19 270 aaPredicted RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 CATSPER4Q7RTX7 472 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 SLC35F6Q8N357 371 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 ADPGKQ9BRR6 497 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 MTMR12Q9C0I1 747 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 NAGPAQ9UK23 515 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 PHACTR2O75167 634 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 ASGR1P07306 291 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 HOXA11P31270 313 aaPredicted RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 NCBP1Q09161 790 aaKnown RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 DCAF4L1Q3SXM0 396 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 TRAPPC11Q7Z392 1133 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 EFCAB13Q8IY85 973 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 SLC30A5Q8TAD4 765 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 ELMO3Q96BJ8 720 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 DDX20Q9UHI6 824 aaKnown RBP18.85■□□□□ 0.61
MBD4-202ENST00000393278 DUSP10Q9Y6W6 482 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 PCNTO95613 3336 aa18.85■□□□□ 0.61
MBD4-202ENST00000393278 FKTNO75072 461 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 CRYBB1P53674 252 aaPredicted RBP18.84■□□□□ 0.61
MBD4-202ENST00000393278 SNX17Q15036 470 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 NAB2Q15742 525 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 KCNA10Q16322 511 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 MYRIPQ8NFW9 859 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 LNX1Q8TBB1 728 aaPredicted RBP18.84■□□□□ 0.61
MBD4-202ENST00000393278 L2HGDHQ9H9P8 463 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 APOBEC3GQ9HC16 384 aaKnown RBP18.84■□□□□ 0.61
MBD4-202ENST00000393278 SAGE1Q9NXZ1 904 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 ATP8B3O60423 1300 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 ANK1P16157 1881 aa18.84■□□□□ 0.61
MBD4-202ENST00000393278 MEFVO15553 781 aaPredicted RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 TMEM191BP0C7N4 346 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 USP8P40818 1118 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 TFAMQ00059 246 aaKnown RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 ARHGEF6Q15052 776 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 SPOPLQ6IQ16 392 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 GDF6Q6KF10 455 aaPredicted RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 ALKBH5Q6P6C2 394 aaKnown RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 APBB1IPQ7Z5R6 666 aaPredicted RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 SESTD1Q86VW0 696 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 TMEM40Q8WWA1 233 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 SECISBP2LQ93073 1101 aaKnown RBP18.83■□□□□ 0.61
MBD4-202ENST00000393278 ANKRD36BP1Q96IX9 119 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 ASB7Q9H672 318 aa18.83■□□□□ 0.61
MBD4-202ENST00000393278 LACTBL1A8MY62 500 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 CST3P01034 146 aaPredicted RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 TNNC2P02585 160 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 AXLP30530 894 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 GRM5P41594 1212 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 NOP14P78316 857 aaKnown RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 NOTUMQ6P988 496 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 SLC27A1Q6PCB7 646 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 GLYCTKQ8IVS8 523 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 PCSK9Q8NBP7 692 aaKnown RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 ZNF296Q8WUU4 475 aaPredicted RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 AGPAT1Q99943 283 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 IMPG2Q9BZV3 1241 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 CENPFP49454 3210 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 MROH7Q68CQ1 1323 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 MACROD2A1Z1Q3 448 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 CYP26A1O43174 497 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 URI1O94763 535 aaPredicted RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 SGPL1O95470 568 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 ASS1P00966 412 aaKnown RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 TNFAIP3P21580 790 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 TBXAS1P24557 533 aaPredicted RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 PRMT2P55345 433 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 SLC10A6Q3KNW5 377 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 EPS8L1Q8TE68 723 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 DHX38Q92620 1227 aaKnown RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 ACAP3Q96P50 834 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 ARID3AQ99856 593 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 PACSIN1Q9BY11 444 aa18.82■□□□□ 0.6
MBD4-202ENST00000393278 NOCTQ9UK39 431 aaKnown RBP18.82■□□□□ 0.6
MBD4-202ENST00000393278 CTAGE9A4FU28 777 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 NPTXRO95502 500 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 MYCNP04198 464 aaPredicted RBP18.81■□□□□ 0.6
MBD4-202ENST00000393278 NFICP08651 508 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 CUL2Q13617 745 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 FAM47CQ5HY64 1035 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 SLAIN1Q8ND83 568 aa18.81■□□□□ 0.6
MBD4-202ENST00000393278 U2AF1L4Q8WU68 220 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms