RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 PHLDB2Q86SQ0 1253 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 FAM71AQ8IYT1 594 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TSGA10Q9BZW7 698 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 CPSF3Q9UKF6 684 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 BZW2Q9Y6E2 419 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 GRID2IPA4D2P6 1211 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TREHO43280 583 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TNFAIP3P21580 790 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 NOP2P46087 812 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 TM4SF4P48230 202 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 FLT3LGP49771 235 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 CLCN6P51797 869 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 GUCY2FP51841 1108 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TFAMQ00059 246 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 PRKCZQ05513 592 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 TFDP1Q14186 410 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 NOA1Q8NC60 698 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 EPS8L1Q8TE68 723 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 SHC3Q92529 594 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 ZBTB9Q96C00 473 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 THAP2Q9H0W7 228 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 KCNG1Q9UIX4 513 aa16.12■□□□□ 0.17
MKS1-202ENST00000393119 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
MKS1-202ENST00000393119 OGTO15294 1046 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 CA12O43570 354 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 GAS2O43903 313 aaKnown RBP16.11■□□□□ 0.17
MKS1-202ENST00000393119 RNASE9P60153 205 aaKnown RBP16.11■□□□□ 0.17
MKS1-202ENST00000393119 KCNN1Q92952 543 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 MS4A14Q96JA4 679 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 OSMRQ99650 979 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 CGRRF1Q99675 332 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 APBA2Q99767 749 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 KIAA1586Q9HCI6 787 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 NOCTQ9UK39 431 aaKnown RBP16.11■□□□□ 0.17
MKS1-202ENST00000393119 SAR1BQ9Y6B6 198 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 PMM2O15305 246 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 TACC1O75410 805 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 MFAP3P55082 362 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 MYL6P60660 151 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 PAPD7Q5XG87 772 aaKnown RBP16.11■□□□□ 0.17
MKS1-202ENST00000393119 LLGL2Q6P1M3 1020 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 BRSK2Q8IWQ3 736 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 TMEM40Q8WWA1 233 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 DNAJB3Q8WWF6 145 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 JPH2Q9BR39 696 aaPredicted RBP16.11■□□□□ 0.17
MKS1-202ENST00000393119 C2orf40Q9H1Z8 148 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 PDZD7Q9H5P4 517 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 HES2Q9Y543 173 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 PPME1Q9Y570 386 aa16.11■□□□□ 0.17
MKS1-202ENST00000393119 SIP14410 1827 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 PHACTR2O75167 634 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 LDHAP00338 332 aaKnown RBP16.1■□□□□ 0.17
MKS1-202ENST00000393119 F2P00734 622 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 ELNP15502 786 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 GTF2H1P32780 548 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 INHBEP58166 350 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 SREBF2Q12772 1141 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 MFSD10Q14728 455 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 IPO4Q8TEX9 1081 aaKnown RBP16.1■□□□□ 0.17
MKS1-202ENST00000393119 NOX5Q96PH1 765 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 COG5Q9UP83 839 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 MYH10P35580 1976 aa16.1■□□□□ 0.17
MKS1-202ENST00000393119 MAGEB2O15479 319 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 IGHA2P01877 340 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 NFICP08651 508 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 H2AFZP0C0S5 128 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 C6orf222P0C671 652 aaPredicted RBP16.09■□□□□ 0.17
MKS1-202ENST00000393119 CYP11B1P15538 503 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 PHKA2P46019 1235 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 FMO1Q01740 532 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 NCOA4Q13772 614 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 ZNF394Q53GI3 561 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 H2AFVQ71UI9 128 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 TRIM58Q8NG06 486 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 TSPAN1O60635 241 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 LACTBP83111 547 aaPredicted RBP16.09■□□□□ 0.17
MKS1-202ENST00000393119 SCARA5Q6ZMJ2 495 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 SRGAP1Q7Z6B7 1085 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 UBXN4Q92575 508 aa16.09■□□□□ 0.17
MKS1-202ENST00000393119 LACTBL1A8MY62 500 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 FTLP02792 175 aaPredicted RBP16.08■□□□□ 0.17
MKS1-202ENST00000393119 RHOXF2BP0C7M4 288 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 CD58P19256 250 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 TMOD1P28289 359 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 PDE4CQ08493 712 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 CXCL17Q6UXB2 119 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 RSRC2Q7L4I2 434 aaKnown RBP16.08■□□□□ 0.17
MKS1-202ENST00000393119 MSL3Q8N5Y2 521 aaKnown RBP16.08■□□□□ 0.17
MKS1-202ENST00000393119 DDX1Q92499 740 aaKnown RBP16.08■□□□□ 0.17
MKS1-202ENST00000393119 RHOXF2Q9BQY4 288 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 ADAMTS10Q9H324 1103 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 ZCCHC17Q9NP64 241 aaKnown RBP16.08■□□□□ 0.17
MKS1-202ENST00000393119 C1orf112Q9NSG2 853 aa16.08■□□□□ 0.17
MKS1-202ENST00000393119 RNF186Q9NXI6 227 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms