RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 XKR3Q5GH77 459 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 CAVIN3Q969G5 261 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 OTUD5Q96G74 571 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 CCT8L2Q96SF2 557 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 FAM187AA6NFU0 413 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 MKRN3Q13064 507 aaKnown RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 DBN1Q16643 649 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 RHPN2Q8IUC4 686 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 ZWILCHQ9H900 591 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 ACTR5Q9H9F9 607 aaPredicted RBP11.22□□□□□ -0.61
CALD1-203ENST00000393118 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
CALD1-203ENST00000393118 GMNCA6NCL1 334 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 RBAK-RBAKDNI3L0D1 243 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 OPLAHO14841 1288 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 PHF2O75151 1096 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 GBP1P32455 592 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 HOXD13P35453 343 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 MARCKSL1P49006 195 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 BACE1P56817 501 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 DHX34Q14147 1143 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 SLC29A2Q14542 456 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 BMT2Q1RMZ1 405 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 TTMPQ5BVD1 217 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 HOMEZQ8IX15 550 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 ZSWIM2Q8NEG5 633 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 RSAD2Q8WXG1 361 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 ZSWIM1Q9BR11 485 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 IQCGQ9H095 443 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 GDF3Q9NR23 364 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 SHANK3Q9BYB0 1731 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 NPM3O75607 178 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 SESN3P58005 492 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 MTM1Q13496 603 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 NOP9Q86U38 636 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 C4orf19Q8IY42 314 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 RNF149Q8NC42 400 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 ELAC2Q9BQ52 826 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 DBR1Q9UK59 544 aaKnown RBP11.21□□□□□ -0.61
CALD1-203ENST00000393118 AKT3Q9Y243 479 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 USH1CQ9Y6N9 552 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 IVNS1ABPQ9Y6Y0 642 aa11.21□□□□□ -0.61
CALD1-203ENST00000393118 PHF20L1A8MW92 1017 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 GOLGA8MH3BSY2 632 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 ADRB2P07550 413 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 PDHA1P08559 390 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 TMED2Q15363 201 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 MAPK6Q16659 721 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 FOXR2Q6PJQ5 311 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 EPM2AIP1Q7L775 607 aaPredicted RBP11.21□□□□□ -0.62
CALD1-203ENST00000393118 LRRC71Q8N4P6 559 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 MBOAT7Q96N66 472 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 CALN1Q9BXU9 219 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 CYP26B1Q9NR63 512 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
CALD1-203ENST00000393118 COL16A1Q07092 1604 aaPredicted RBP11.21□□□□□ -0.62
CALD1-203ENST00000393118 VWA5AO00534 786 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.62
CALD1-203ENST00000393118 GGPS1O95749 300 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 MUTP22033 750 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 NOVP48745 357 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 STAT5BP51692 787 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 MAPK7Q13164 816 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 DDX60Q8IY21 1712 aaKnown RBP11.21□□□□□ -0.62
CALD1-203ENST00000393118 NSMCE1Q8WV22 266 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 KIAA1683Q9H0B3 1180 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 KIAA1586Q9HCI6 787 aa11.21□□□□□ -0.62
CALD1-203ENST00000393118 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 P4HA2O15460 535 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 RRM1P23921 792 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 SLC30A9Q6PML9 568 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ERICH1Q86X53 443 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 SLC38A10Q9HBR0 1119 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 PLCH1Q4KWH8 1693 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 IGSF9BQ9UPX0 1349 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 LDHAP00338 332 aaKnown RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 LONRF1Q17RB8 773 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 PARD3BQ8TEW8 1205 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ATP8B4Q8TF62 1192 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ZNF473Q8WTR7 871 aaKnown RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 ACSF2Q96CM8 615 aaPredicted RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 EPN3Q9H201 632 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 UVRAGQ9P2Y5 699 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 FBXO40Q9UH90 709 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 DIAPH2O60879 1101 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 FDX1P10109 184 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 CDR2Q01850 454 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ADCY2Q08462 1091 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 NCOA4Q13772 614 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ZNF568Q3ZCX4 644 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 CYB5D1Q6P9G0 228 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 SLC13A5Q86YT5 568 aaPredicted RBP11.2□□□□□ -0.62
CALD1-203ENST00000393118 SCYL3Q8IZE3 742 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 ANKRD36BP1Q96IX9 119 aa11.2□□□□□ -0.62
CALD1-203ENST00000393118 C9orf72Q96LT7 481 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms