RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 NR1H4Q96RI1 486 aaPredicted RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 TMEM117Q9H0C3 514 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 F8W8V4 182 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 SRP72O76094 671 aaKnown RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 GFAPP14136 432 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 MTHFD1LQ6UB35 978 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 FOXP4Q8IVH2 680 aaPredicted RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 SRBD1Q8N5C6 995 aaKnown RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 MTRQ99707 1265 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 C7orf25Q9BPX7 421 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 TBC1D22BQ9NU19 505 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 UBA6A0AVT1 1052 aaPredicted RBP13.17□□□□□ -0.3
FANCA-202ENST00000389301 PYGLP06737 847 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 TNFAIP2Q03169 654 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 ADGRF4Q8IZF3 695 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 BEGAINQ9BUH8 593 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 PHF20Q9BVI0 1012 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 STAP1Q9ULZ2 295 aa13.17□□□□□ -0.3
FANCA-202ENST00000389301 ARHGEF37A1IGU5 675 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CIITAP33076 1130 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 PSMD7P51665 324 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 DNAJC3Q13217 504 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 LMBRD2Q68DH5 695 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 RFWD2Q8NHY2 731 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 GOLPH3Q9H4A6 298 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CASS4Q9NQ75 786 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CHMP2BQ9UQN3 213 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CPDO75976 1380 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 H3BQF6 201 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 STK4Q13043 487 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 ITIH4Q14624 930 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 HLFQ16534 295 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 KIRREL3Q8IZU9 778 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 PPCSQ9HAB8 311 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 PDS5AQ29RF7 1337 aaKnown RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 APBA3O96018 575 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 APRTP07741 180 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 CATSPER4Q7RTX7 472 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 C3orf20Q8ND61 904 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 INPP5DQ92835 1189 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 RMDN3Q96TC7 470 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 ZNF341Q9BYN7 854 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 POLR3FQ9H1D9 316 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 SYNDIG1LA6NDD5 238 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 DGKIO75912 1065 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 TMCC1O94876 653 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 KLRC1P26715 233 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CCNA1P78396 465 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 PLOD1Q02809 727 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 APLFQ8IW19 511 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 OSBPL8Q9BZF1 889 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 FAM49AQ9H0Q0 323 aaPredicted RBP13.16□□□□□ -0.3
FANCA-202ENST00000389301 GID8Q9NWU2 228 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 SERPINI2O75830 405 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 COMTP21964 271 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 ADORA2BP29275 332 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 CCDC15Q0P6D6 951 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 ZCWPW2Q504Y3 356 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 DONSONQ9NYP3 566 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 BLOC1S6Q9UL45 172 aa13.16□□□□□ -0.3
FANCA-202ENST00000389301 ARHGEF5Q12774 1597 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 SOX11P35716 441 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 KCNJ1P48048 391 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 CACNB3P54284 484 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 KRT76Q01546 638 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 COL23A1Q86Y22 540 aaPredicted RBP13.15□□□□□ -0.3
FANCA-202ENST00000389301 LZICQ8WZA0 190 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
FANCA-202ENST00000389301 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 GIMAP4Q9NUV9 329 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 UTYO14607 1347 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 LOC100653049A0A140TA62 436 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 KRT34O76011 436 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 PDHBP11177 359 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 FMO5P49326 533 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 SERPINB9P50453 376 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 MAP3K7CLP57077 242 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 ABCE1P61221 599 aaKnown RBP13.15□□□□□ -0.3
FANCA-202ENST00000389301 KPNB1Q14974 876 aaKnown RBP13.15□□□□□ -0.3
FANCA-202ENST00000389301 TBCCQ15814 346 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 NAIF1Q69YI7 327 aaPredicted RBP13.15□□□□□ -0.3
FANCA-202ENST00000389301 C3orf62Q6ZUJ4 267 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 TRAPPC11Q7Z392 1133 aa13.15□□□□□ -0.3
FANCA-202ENST00000389301 HAUS6Q7Z4H7 955 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms