RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 PGM3O95394 542 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ALOX12P18054 663 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 C5AR1P21730 350 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 HMGB2P26583 209 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ADH6P28332 368 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ABCD1P33897 745 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 TMPOP42166 694 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 AGFG1P52594 562 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RARSP54136 660 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RIPK4P57078 832 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SESN3P58005 492 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 AKAP17AQ02040 695 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ZNF543Q08ER8 600 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ANKRD39Q53RE8 183 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ZMYM1Q5SVZ6 1142 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 GALNT7Q86SF2 657 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SIAH1Q8IUQ4 282 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RNF152Q8N8N0 203 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 CREB3L4Q8TEY5 395 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 TGFBRAP1Q8WUH2 860 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RIN2Q8WYP3 895 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ASIC4Q96FT7 647 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 PNMA5Q96PV4 448 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 TMEM237Q96Q45 408 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 GSDMAQ96QA5 445 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 PIGSQ96S52 555 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 THUMPD2Q9BTF0 503 aaKnown RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RPAP3Q9H6T3 665 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SUDS3Q9H7L9 328 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 CCM2LQ9NUG4 571 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 RNF181Q9P0P0 153 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 LRFN1Q9P244 771 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 GPN3Q9UHW5 284 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 SH3BGRL2Q9UJC5 107 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 HCN2Q9UL51 889 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 PCDHGB4Q9UN71 923 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 TTC21AQ8NDW8 1320 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 CNTNAP1P78357 1384 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 PALLDQ8WX93 1383 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 KDM6AO15550 1401 aaPredicted RBP6.29□□□□□ -1.4
ERCC4-202ENST00000389138 MEGF6O75095 1541 aa6.29□□□□□ -1.4
ERCC4-202ENST00000389138 POM121BA6NF01 834 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 H0Y626 953 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 TRIM38O00635 465 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 TNFRSF10CO14798 259 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 SPTLC2O15270 562 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 SOCS5O75159 536 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ERAL1O75616 437 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 KRT13P13646 458 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PRKAR2BP31323 418 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ADH7P40394 386 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CACNB3P54284 484 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CASP6P55212 293 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 EXOSC9Q06265 439 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PDCD1Q15116 288 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 FBXO47Q5MNV8 452 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 RAPH1Q70E73 1250 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 SMIM5Q71RC9 77 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 NUP93Q8N1F7 819 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 MIER2Q8N344 545 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 GALNT15Q8N3T1 639 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 LRRC71Q8N4P6 559 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CHST13Q8NET6 341 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 LRTOMTQ8WZ04 291 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 RFFLQ8WZ73 363 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 MVB12AQ96EY5 273 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PLEKHF1Q96S99 279 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CCDC177Q9NQR7 707 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 GMIPQ9P107 970 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 KIF17Q9P2E2 1029 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 POLKQ9UBT6 870 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ADD3Q9UEY8 706 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PDE4DIPQ5VU43 2346 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 LGALS16A8MUM7 142 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PDCP20941 246 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 STIP1P31948 543 aaKnown RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 ACSL1P33121 698 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 HSPA7P48741 367 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 LBX1P52954 281 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 YBEYP58557 167 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 GPR85P60893 370 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CCDC15Q0P6D6 951 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 TAF7Q15545 349 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 TIGD6Q17RP2 521 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 MPEG1Q2M385 716 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 C5orf22Q49AR2 442 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CREB3L3Q68CJ9 461 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 IL27RAQ6UWB1 636 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 SLCO4C1Q6ZQN7 724 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 CENPQQ7L2Z9 268 aaPredicted RBP6.28□□□□□ -1.4
ERCC4-202ENST00000389138 OR8H3Q8N146 312 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 PMEPA1Q969W9 287 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 C1GALT1C1Q96EU7 318 aa6.28□□□□□ -1.4
ERCC4-202ENST00000389138 SLC30A3Q99726 388 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms