RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SCINQ9Y6U3 715 aa13.34□□□□□ -0.27
CDX2-201ENST00000381020 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 GTF2H1P32780 548 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 EPHX2P34913 555 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 ATF7IP2Q5U623 682 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 MED10Q9BTT4 135 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 NSRP1Q9H0G5 558 aaKnown RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 SLITRK6Q9H5Y7 841 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 TTLL3Q9Y4R7 772 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 GOLGA8MH3BSY2 632 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 PLA2G6O60733 806 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 SLC25A27O95847 323 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 BRD2P25440 801 aaKnown RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 MMP14P50281 582 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 PPP2R5DQ14738 602 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 CASC4Q6P4E1 433 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 TAOK1Q7L7X3 1001 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 KCTD6Q8NC69 237 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 RAB21Q9UL25 225 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 AGAP1Q9UPQ3 857 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 PCDHA2Q9Y5H9 948 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 PDE4DIPQ5VU43 2346 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 EDIL3O43854 480 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 MAGOHP61326 146 aaKnown RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 CDR2Q01850 454 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 BMT2Q1RMZ1 405 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 IER5Q5VY09 327 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 NOP9Q86U38 636 aaKnown RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDX2-201ENST00000381020 LNX1Q8TBB1 728 aaPredicted RBP13.33□□□□□ -0.28
CDX2-201ENST00000381020 ADAM33Q9BZ11 813 aa13.33□□□□□ -0.28
CDX2-201ENST00000381020 M0QYV0 167 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 PODXLO00592 558 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 ZNF862O60290 1169 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MYL3P08590 195 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 ATP2A2P16615 1042 aaKnown RBP13.32□□□□□ -0.28
CDX2-201ENST00000381020 FGFR4P22455 802 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 PPP6R3Q5H9R7 873 aaPredicted RBP13.32□□□□□ -0.28
CDX2-201ENST00000381020 AADACL2Q6P093 401 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MAP4K3Q8IVH8 894 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 CCDC63Q8NA47 563 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 GPRC5AQ8NFJ5 357 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 KIF12Q96FN5 646 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MLXIPLQ9NP71 852 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MED7O43513 233 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 GJB1P08034 283 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 CHRNA3P32297 505 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 RFC5P40937 340 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 NAMPTP43490 491 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 GTF2BQ00403 316 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 GUCY1A3Q02108 690 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 PALM2Q8IXS6 379 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 DAW1Q8N136 415 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MTMR14Q8NCE2 650 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 PPP1R14CQ8TAE6 165 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 ATG4AQ8WYN0 398 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 DIS3Q9Y2L1 958 aaKnown RBP13.32□□□□□ -0.28
CDX2-201ENST00000381020 ZNF536O15090 1300 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 RASGRF2O14827 1237 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 MYCP01106 439 aaPredicted RBP13.32□□□□□ -0.28
CDX2-201ENST00000381020 VTNP04004 478 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 GARTP22102 1010 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 LIG3P49916 1009 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 BASP1P80723 227 aaKnown RBP13.32□□□□□ -0.28
CDX2-201ENST00000381020 MYO1EQ12965 1108 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 PALB2Q86YC2 1186 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 HVCN1Q96D96 273 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 ERAP1Q9NZ08 941 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 UVRAGQ9P2Y5 699 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 NUB1Q9Y5A7 615 aa13.32□□□□□ -0.28
CDX2-201ENST00000381020 CAPN9O14815 690 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 GRAP2O75791 330 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 FAM153BP0C7A2 387 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 ATP11AP98196 1134 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CUL2Q13617 745 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 FAM153CQ494X1 144 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CCDC38Q502W7 563 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CYP4A22Q5TCH4 519 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 CCDC13Q8IYE1 715 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 ASAP3Q8TDY4 903 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 BSNDQ8WZ55 320 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 C18orf8Q96DM3 657 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 INPP4AQ96PE3 977 aaPredicted RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 MCEEQ96PE7 176 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 MIS12Q9H081 205 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 SPC25Q9HBM1 224 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 INTS9Q9NV88 658 aaKnown RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 FAM153AQ9UHL3 310 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 INTUQ9ULD6 942 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 IQCA1LA6NCM1 817 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
CDX2-201ENST00000381020 MYL6P60660 151 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 MYBPC2Q14324 1141 aa13.31□□□□□ -0.28
CDX2-201ENST00000381020 ZKSCAN8Q15776 578 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms