RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 MTRRQ9UBK8 725 aa15.56■□□□□ 0.08
PTCH1-202ENST00000375271 MTF2Q9Y483 593 aaPredicted RBP15.56■□□□□ 0.08
PTCH1-202ENST00000375271 CACNA1IQ9P0X4 2223 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 PATJQ8NI35 1801 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 MAN2B1O00754 1011 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 PTGESO14684 152 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 TBC1D4O60343 1298 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 RHOP08100 348 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 PTPN2P17706 415 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 ADCY1Q08828 1119 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 FAM187BQ17R55 369 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 GLRA4Q5JXX5 417 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 CDCA2Q69YH5 1023 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-202ENST00000375271 MAML2Q8IZL2 1156 aaPredicted RBP15.55■□□□□ 0.08
PTCH1-202ENST00000375271 DNASE1L2Q92874 299 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 FZD8Q9H461 694 aa15.55■□□□□ 0.08
PTCH1-202ENST00000375271 DNMT3BQ9UBC3 853 aaKnown RBP15.55■□□□□ 0.08
PTCH1-202ENST00000375271 NDRG2Q9UN36 371 aaKnown RBP15.55■□□□□ 0.08
PTCH1-202ENST00000375271 A0A087WWV3 80 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 FAM205CA6NFA0 338 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 ACKR2O00590 384 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 ZNF197O14709 1029 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 ADAM12O43184 909 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 PFKFB2O60825 505 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 FGFR3P22607 806 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 TARSP26639 723 aaKnown RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 NAMPTP43490 491 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 RPS9P46781 194 aaKnown RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 RBM25P49756 843 aaKnown RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 EFNA5P52803 228 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 FOSBP53539 338 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 ARPP19P56211 112 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 SAFBQ15424 915 aaKnown RBP eCLIP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 CYP4A22Q5TCH4 519 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 IQCEQ6IPM2 695 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 PDZD4Q76G19 769 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 CORO1BQ9BR76 489 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 CCDC94Q9BW85 323 aaPredicted RBP15.54■□□□□ 0.08
PTCH1-202ENST00000375271 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 ZFP14Q9HCL3 533 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 HEBP1Q9NRV9 189 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 SLC38A7Q9NVC3 462 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 NUB1Q9Y5A7 615 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 BACE2Q9Y5Z0 518 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 DNAH14Q0VDD8 3507 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 OTOGLQ3ZCN5 2332 aa15.54■□□□□ 0.08
PTCH1-202ENST00000375271 DOCK6Q96HP0 2047 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 H7C4K7 107 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 TMEM189-UBE2V1I3L0A0 370 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 TKTP29401 623 aaKnown RBP15.53■□□□□ 0.08
PTCH1-202ENST00000375271 CLCNKBP51801 687 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 HAUS3Q68CZ6 603 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 TSSK4Q6SA08 328 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 PRR23BQ6ZRT6 265 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 DIS3L2Q8IYB7 885 aaKnown RBP15.53■□□□□ 0.08
PTCH1-202ENST00000375271 ELSPBP1Q96BH3 223 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 DDX27Q96GQ7 796 aaKnown RBP15.53■□□□□ 0.08
PTCH1-202ENST00000375271 RTKNQ9BST9 563 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 IER2Q9BTL4 223 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 TRMT61BQ9BVS5 477 aaKnown RBP15.53■□□□□ 0.08
PTCH1-202ENST00000375271 CYP4F11Q9HBI6 524 aa15.53■□□□□ 0.08
PTCH1-202ENST00000375271 CEBPBP17676 345 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 MCM7P33993 719 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 GRM2Q14416 872 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 ATF7IP2Q5U623 682 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 ZBTB44Q8NCP5 570 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 IRF7Q92985 503 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 CLDN23Q96B33 292 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 SLITRK6Q9H5Y7 841 aa15.52■□□□□ 0.08
PTCH1-202ENST00000375271 I3L4J1 428 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 KCNA4P22459 653 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 CCR3P51677 355 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 ATXN1P54253 815 aaKnown RBP15.51■□□□□ 0.07
PTCH1-202ENST00000375271 ROR1Q01973 937 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 MTAPQ13126 283 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 GNL2Q13823 731 aaKnown RBP15.51■□□□□ 0.07
PTCH1-202ENST00000375271 TANGO2Q6ICL3 276 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 CATSPER3Q86XQ3 398 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 YAF2Q8IY57 180 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 ZNF461Q8TAF7 563 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 FAM200AQ8TCP9 573 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 KIFAP3Q92845 792 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 ZNF512Q96ME7 567 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-202ENST00000375271 CNTNAP3BQ96NU0 1288 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 CNTNAP3Q9BZ76 1288 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 PRMT8Q9NR22 394 aaPredicted RBP15.51■□□□□ 0.07
PTCH1-202ENST00000375271 TPCN1Q9ULQ1 816 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 VWA8A3KMH1 1905 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 CEP250Q9BV73 2442 aa15.51■□□□□ 0.07
PTCH1-202ENST00000375271 PHLPP2Q6ZVD8 1323 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 BTBD18B2RXH4 712 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 K7ERI5 159 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 DTNBO60941 627 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 CYP11B2P19099 503 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 GDI1P31150 447 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 BRCC3P46736 316 aa15.5■□□□□ 0.07
PTCH1-202ENST00000375271 LPAL2Q16609 132 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms