RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 ZNF263O14978 683 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 VNN1O95497 513 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 PNMA6AP0CW24 399 aaPredicted RBP28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 VAV2P52735 878 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 MRPS6P82932 125 aaKnown RBP28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 GFPT1Q06210 699 aaPredicted RBP28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 ZNF571Q7Z3V5 609 aaPredicted RBP28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 KIF18AQ8NI77 898 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 FAM84AQ96KN4 292 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 ASB7Q9H672 318 aa28.35■■■□□ 2.13
ATPAF1-202ENST00000371937 MOXD2PA6NHM9 499 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 KIF5CO60282 957 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TMEM191BP0C7N4 346 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ACLYP53396 1101 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 NCOA4Q13772 614 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TRAPPC11Q7Z392 1133 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 RPAINQ86UA6 219 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TMEM192Q8IY95 271 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TMEM40Q8WWA1 233 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ZNF592Q92610 1267 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ANKRD36BP1Q96IX9 119 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 KREMEN1Q96MU8 473 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ACAP3Q96P50 834 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TSEN34Q9BSV6 310 aaKnown RBP28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 PI4K2AQ9BTU6 479 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 IMPG2Q9BZV3 1241 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ADAMTS1Q9UHI8 967 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 PAXBP1Q9Y5B6 917 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 PTCH2Q9Y6C5 1203 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 KRT86O43790 486 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TNNC2P02585 160 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 GRM5P41594 1212 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 ARHGAP25P42331 645 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TFAMQ00059 246 aaKnown RBP28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 SHC3Q92529 594 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TATDN2Q93075 761 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 TSGA10Q9BZW7 698 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 MTMR12Q9C0I1 747 aa28.34■■■□□ 2.13
ATPAF1-202ENST00000371937 CENPFP49454 3210 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 A0A0U1RQJ8 604 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 MAGEA1P43355 309 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 GNG11P61952 73 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 PTPN11Q06124 597 aaPredicted RBP28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 KIF5AQ12840 1032 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 SYT10Q6XYQ8 523 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 ATRIPQ8WXE1 791 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 JAKMIP2Q96AA8 810 aa28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 CCDC94Q9BW85 323 aaPredicted RBP28.33■■■□□ 2.13
ATPAF1-202ENST00000371937 GRIN2DO15399 1336 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 MROH7Q68CQ1 1323 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 ITGA7Q13683 1181 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 BMS1Q14692 1282 aaKnown RBP28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 CCDC122Q5T0U0 273 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 C10orf76Q5T2E6 689 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 LHX8Q68G74 356 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 CD302Q8IX05 232 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 FAM71AQ8IYT1 594 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 KAT5Q92993 513 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 MYO1AQ9UBC5 1043 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 TRPV2Q9Y5S1 764 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 A0A087X0T9 212 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 LACTBL1A8MY62 500 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 NPTXRO95502 500 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 FAM228BP0C875 321 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 PTGISQ16647 500 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 EFCAB13Q8IY85 973 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 GLT1D1Q96MS3 346 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 TSKSQ9UJT2 592 aa28.32■■■□□ 2.12
ATPAF1-202ENST00000371937 TRPC3Q13507 836 aa28.31■■■□□ 2.12
ATPAF1-202ENST00000371937 SLC10A6Q3KNW5 377 aa28.31■■■□□ 2.12
ATPAF1-202ENST00000371937 ARRDC4Q8NCT1 418 aa28.31■■■□□ 2.12
ATPAF1-202ENST00000371937 PIN4Q9Y237 131 aaKnown RBP28.31■■■□□ 2.12
ATPAF1-202ENST00000371937 CDY2AQ9Y6F7 541 aa28.31■■■□□ 2.12
ATPAF1-202ENST00000371937 USP8P40818 1118 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 SGSM1Q2NKQ1 1148 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 NT5DC4Q86YG4 428 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 TRIM6Q9C030 488 aaPredicted RBP28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 PLEKHA5Q9HAU0 1116 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 DNAI1Q9UI46 699 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 HTTP42858 3142 aa28.3■■■□□ 2.12
ATPAF1-202ENST00000371937 TBXAS1P24557 533 aaPredicted RBP28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 NOP14P78316 857 aaKnown RBP28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 GUCA1BQ9UMX6 200 aa28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 ASS1P00966 412 aaKnown RBP28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 LACRTQ9GZZ8 138 aa28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 ANK1P16157 1881 aa28.29■■■□□ 2.12
ATPAF1-202ENST00000371937 RCCD1A6NED2 376 aa28.28■■■□□ 2.12
ATPAF1-202ENST00000371937 CST3P01034 146 aaPredicted RBP28.28■■■□□ 2.12
ATPAF1-202ENST00000371937 JADE1Q6IE81 842 aa28.28■■■□□ 2.12
ATPAF1-202ENST00000371937 NOD1Q9Y239 953 aa28.28■■■□□ 2.12
ATPAF1-202ENST00000371937 C2CD2Q9Y426 696 aa28.28■■■□□ 2.12
ATPAF1-202ENST00000371937 PJA2O43164 708 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 CLSTN1O94985 981 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 ABL1P00519 1130 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 NFICP08651 508 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 YARSP54577 528 aaKnown RBP28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 PTK7Q13308 1070 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 CUL2Q13617 745 aa28.27■■■□□ 2.12
ATPAF1-202ENST00000371937 NAB2Q15742 525 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms