RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 UPF3AQ9H1J1 476 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 VPS11Q9H270 941 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 EXTL3O43909 919 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 GYS1P13807 737 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
DEPDC1-201ENST00000370966 ZBTB22O15209 634 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 ZBTB24O43167 697 aaPredicted RBP12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 MED24O75448 989 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 NOP14P78316 857 aaKnown RBP12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 LRRC14Q15048 493 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 IER5Q5VY09 327 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 NUDCD3Q8IVD9 361 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 FSD1LQ9BXM9 530 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 ETNK1Q9HBU6 452 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 AGAP1Q9UPQ3 857 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 F8W8V4 182 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 APOL1O14791 398 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 IL1R1P14778 569 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 PDGFRAP16234 1089 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 NPEPPSP55786 919 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 NFIAQ12857 509 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 MYBPC2Q14324 1141 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 AGBL1Q96MI9 1066 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 DRC3Q9H069 523 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 TMEM117Q9H0C3 514 aa12.52□□□□□ -0.4
DEPDC1-201ENST00000370966 RIMBP3CA6NJZ7 1639 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 RIMBP3BA6NNM3 1639 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 RIMBP3Q9UFD9 1639 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 CREB3O43889 395 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC25A27O95847 323 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 PON1P27169 355 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 SEMA6BQ9H3T3 888 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 TRABDQ9H4I3 376 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 PPP1R12AO14974 1030 aaPredicted RBP12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 IL18RAPO95256 599 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 PLEKP08567 350 aaPredicted RBP12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 ELF1P32519 619 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 OCRLQ01968 901 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 ACAD11Q709F0 780 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 ZC3H18Q86VM9 953 aaKnown RBP12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 ZIM3Q96PE6 472 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 TMEM39BQ9GZU3 492 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 DCTN4Q9UJW0 460 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 FIS1Q9Y3D6 152 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 BCL9O00512 1426 aa12.52□□□□□ -0.41
DEPDC1-201ENST00000370966 GTPBP10A4D1E9 387 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 PI4K2BG5E9Z4 385 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 CCDC22O60826 627 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 ACTR2P61160 394 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 ESRRGP62508 458 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 CENPCQ03188 943 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 ICE2Q659A1 982 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SRLQ86TD4 932 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 RYBPQ8N488 228 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 RIN2Q8WYP3 895 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 NIF3L1Q9GZT8 377 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 PRMT7Q9NVM4 692 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 RNF181Q9P0P0 153 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 G3BP2Q9UN86 482 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 TRIM33Q9UPN9 1127 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 CFLARO15519 480 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 CAP2P40123 477 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 FNTAP49354 379 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 GIT2Q14161 759 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 HP1BP3Q5SSJ5 553 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 FUT8Q9BYC5 575 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 TBX20Q9UMR3 447 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 HNRNPCL1O60812 293 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SPAG7O75391 227 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 TYK2P29597 1187 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 IRAK1P51617 712 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 E2F4Q16254 413 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 Q4G0T1 1027 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SPATA21Q7Z572 469 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SCN4BQ8IWT1 228 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 GMCL1P1Q8NEA9 526 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 DDX27Q96GQ7 796 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 LACRTQ9GZZ8 138 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SMARCAL1Q9NZC9 954 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 L1RE1Q9UN81 338 aa12.51□□□□□ -0.41
DEPDC1-201ENST00000370966 SMIM24O75264 130 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SPAG6O75602 509 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 NFKBIAP25963 317 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 ADORA2BP29275 332 aa12.5□□□□□ -0.41
DEPDC1-201ENST00000370966 SATB1Q01826 763 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms