RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 TPM4P67936 248 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 MYL5Q02045 173 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 GPM6BQ13491 265 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 MYBPC2Q14324 1141 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 NFIL3Q16649 462 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 NOMO2Q5JPE7 1267 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 TTI2Q6NXR4 508 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 SLC9A9Q8IVB4 645 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 FAM186BQ8IYM0 893 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
EFNA1-201ENST00000368406 GDPD5Q8WTR4 605 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 CEP63Q96MT8 703 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
EFNA1-201ENST00000368406 GIT1Q9Y2X7 761 aa13.74□□□□□ -0.21
EFNA1-201ENST00000368406 PRRC2BQ5JSZ5 2229 aaKnown RBP13.74□□□□□ -0.21
EFNA1-201ENST00000368406 MEIS3P2A8K0S8 358 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 IL18RAPO95256 599 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 ENOX2Q16206 610 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 PTPROQ16827 1216 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 USP37Q86T82 979 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CBWD2Q8IUF1 395 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 FAM114A1Q8IWE2 563 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 ZSWIM2Q8NEG5 633 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 FNBP1Q96RU3 617 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 DUSP9Q99956 384 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 FUCA2Q9BTY2 467 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 LMAN2LQ9H0V9 348 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CPSF3Q9UKF6 684 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 PLAGL2Q9UPG8 496 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 A0A0C4DFX4 3053 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 UNC80Q8N2C7 3258 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 ARL5CA6NH57 179 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 GOLGA6L19H0YKK7 550 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CLSTN1O94985 981 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CAVIN2O95810 425 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 DLATP10515 647 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CASP4P49662 377 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 DCAF17Q5H9S7 520 aaPredicted RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SPOUT1Q5T280 376 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SPATA1Q5VX52 437 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 FOXR2Q6PJQ5 311 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 BRSK2Q8IWQ3 736 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 KLHL23Q8NBE8 558 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 COLGALT1Q8NBJ5 622 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 CCDC127Q96BQ5 260 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 SNX27Q96L92 541 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 ZFP42Q96MM3 310 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 GAD1Q99259 594 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 TBC1D13Q9NVG8 400 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 DMAC2Q9NW81 257 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 NFE2L3Q9Y4A8 694 aa13.73□□□□□ -0.21
EFNA1-201ENST00000368406 TDRD15B5MCY1 1934 aaKnown RBP13.73□□□□□ -0.21
EFNA1-201ENST00000368406 COL4A4P53420 1690 aaPredicted RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 XIRP2A4UGR9 3374 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 LACTBL1A8MY62 500 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 XPOTO43592 962 aaKnown RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 FAM189A1O60320 539 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 AKAP3O75969 853 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 GNA14O95837 355 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 POMCP01189 267 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ADRB2P07550 413 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 TNNI1P19237 187 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 PPM1AP35813 382 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 SCNN1GP51170 649 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ZNF445P59923 1031 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 UBE3AQ05086 875 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 CYP24A1Q07973 514 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 TMEM132DQ14C87 1099 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 SURF1Q15526 300 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 HSP90AA4PQ58FG1 418 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 KCNT2Q6UVM3 1135 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 INTS8Q75QN2 995 aaKnown RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 CD302Q8IX05 232 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ANKRD20A12PQ8NF67 263 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ENOX1Q8TC92 643 aaKnown RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 SPPL3Q8TCT6 385 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 KIF12Q96FN5 646 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ZNF558Q96NG5 402 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 BPIFA3Q9BQP9 254 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 MKNK1Q9BUB5 465 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 THAP9Q9H5L6 903 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 HCSTQ9UBK5 93 aa13.72□□□□□ -0.21
EFNA1-201ENST00000368406 ARMCX3Q9UH62 379 aaPredicted RBP13.72□□□□□ -0.21
EFNA1-201ENST00000368406 KIAA1671Q9BY89 1806 aa13.71□□□□□ -0.21
EFNA1-201ENST00000368406 ANK1P16157 1881 aa13.71□□□□□ -0.21
EFNA1-201ENST00000368406 PDCD11Q14690 1871 aaKnown RBP13.71□□□□□ -0.22
EFNA1-201ENST00000368406 GRM6O15303 877 aa13.71□□□□□ -0.22
EFNA1-201ENST00000368406 FGF18O76093 207 aa13.71□□□□□ -0.22
EFNA1-201ENST00000368406 ITGB1P05556 798 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms