RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 MAN1B1Q9UKM7 699 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 ANK1P16157 1881 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 COL6A3P12111 3177 aa20.31■□□□□ 0.84
LMNA-204ENST00000368298 LACTBL1A8MY62 500 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 GRM6O15303 877 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 EFEMP2O95967 443 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 KRT17Q04695 432 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 CAMK1Q14012 370 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 MYBPC2Q14324 1141 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 HSP90AA2PQ14568 343 aaPredicted RBP20.3■□□□□ 0.84
LMNA-204ENST00000368298 NFIL3Q16649 462 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 GLRA4Q5JXX5 417 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 ZSWIM2Q8NEG5 633 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 MYLIPQ8WY64 445 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 UROC1Q96N76 676 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 FAM213AQ9BRX8 229 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 PCIF1Q9H4Z3 704 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 ALG13Q9NP73 1137 aaKnown RBP20.3■□□□□ 0.84
LMNA-204ENST00000368298 DMAC2Q9NW81 257 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 STK39Q9UEW8 545 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 DERAQ9Y315 318 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 NT5C1B-RDH14C9J2C7 533 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 LETM1O95202 739 aaPredicted RBP20.3■□□□□ 0.84
LMNA-204ENST00000368298 PRCPP42785 496 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 MORC3Q14149 939 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 CAMK4Q16566 473 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 TMEM173Q86WV6 379 aaPredicted RBP20.3■□□□□ 0.84
LMNA-204ENST00000368298 BRSK2Q8IWQ3 736 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 TRIML1Q8N9V2 468 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 MRPL38Q96DV4 380 aaKnown RBP20.3■□□□□ 0.84
LMNA-204ENST00000368298 SAAL1Q96ER3 474 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 MTCH2Q9Y6C9 303 aa20.3■□□□□ 0.84
LMNA-204ENST00000368298 CLIC2O15247 247 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 IL18RAPO95256 599 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 CYP3A5P20815 502 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 BMP6P22004 513 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 DNAJB1P25685 340 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 OR1G1P47890 313 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 SOX4Q06945 474 aaPredicted RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 PTPROQ16827 1216 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 ZCWPW2Q504Y3 356 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 DDX53Q86TM3 631 aaKnown RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 NT5DC4Q86YG4 428 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 SMYD4Q8IYR2 804 aaPredicted RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 XXYLT1Q8NBI6 393 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 BCL7CQ8WUZ0 217 aaPredicted RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 DDX27Q96GQ7 796 aaKnown RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 TMEM169Q96HH4 297 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 COLEC11Q9BWP8 271 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 MARCH5Q9NX47 278 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 PUF60Q9UHX1 559 aaKnown RBP20.29■□□□□ 0.84
LMNA-204ENST00000368298 MAPK8IP1Q9UQF2 711 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 C2CD2Q9Y426 696 aa20.29■□□□□ 0.84
LMNA-204ENST00000368298 GOLGA8IPA6NC78 632 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 ZNF233A6NK53 670 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 GOLGA8JA6NMD2 632 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 TMEM189-UBE2V1I3L0A0 370 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 RPL9P32969 192 aaKnown RBP20.28■□□□□ 0.84
LMNA-204ENST00000368298 PPP1R2P41236 205 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 UPP1Q16831 310 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 CENPPQ6IPU0 288 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 RNF168Q8IYW5 571 aaPredicted RBP20.28■□□□□ 0.84
LMNA-204ENST00000368298 ADSSL1Q8N142 457 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 POF1BQ8WVV4 589 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 UBQLN1Q9UMX0 589 aaKnown RBP20.28■□□□□ 0.84
LMNA-204ENST00000368298 STXBP5LQ9Y2K9 1186 aa20.28■□□□□ 0.84
LMNA-204ENST00000368298 CALUO43852 315 aaPredicted RBP20.27■□□□□ 0.84
LMNA-204ENST00000368298 LRPAP1P30533 357 aa20.27■□□□□ 0.84
LMNA-204ENST00000368298 PDE12Q6L8Q7 609 aaKnown RBP20.27■□□□□ 0.84
LMNA-204ENST00000368298 DCLRE1AQ6PJP8 1040 aa20.27■□□□□ 0.84
LMNA-204ENST00000368298 C18orf25Q96B23 403 aaPredicted RBP20.27■□□□□ 0.84
LMNA-204ENST00000368298 KIF12Q96FN5 646 aa20.27■□□□□ 0.84
LMNA-204ENST00000368298 NUP62CLQ9H1M0 184 aa20.27■□□□□ 0.84
LMNA-204ENST00000368298 TSPY26PQ9H489 355 aa20.27■□□□□ 0.84
LMNA-204ENST00000368298 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.84
LMNA-204ENST00000368298 ATG2AQ2TAZ0 1938 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 CASTOR2A6NHX0 329 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 FSCN2O14926 492 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 XPOTO43592 962 aaKnown RBP20.26■□□□□ 0.83
LMNA-204ENST00000368298 FOSL2P15408 326 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
LMNA-204ENST00000368298 EDRF1Q3B7T1 1238 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 SPATA1Q5VX52 437 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 JADE1Q6IE81 842 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 CBWD2Q8IUF1 395 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 VN1R3Q9BXE9 311 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 TLR9Q9NR96 1032 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 ADAM28Q9UKQ2 775 aa20.26■□□□□ 0.83
LMNA-204ENST00000368298 PRG3Q9Y2Y8 225 aaPredicted RBP20.26■□□□□ 0.83
LMNA-204ENST00000368298 NR3C1P04150 777 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 IGFBP4P22692 258 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 CYP2J2P51589 502 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 CLCNKBP51801 687 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 WNT7BP56706 349 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 SPAG1Q07617 926 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 SURF1Q15526 300 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 FOXR2Q6PJQ5 311 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 FAM212AQ96EL1 285 aa20.25■□□□□ 0.83
LMNA-204ENST00000368298 DHTKD1Q96HY7 919 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms