RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RPP40O75818 363 aaKnown RBP16.32■□□□□ 0.2
VAMP4-202ENST00000367740 CCR2P41597 374 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
VAMP4-202ENST00000367740 RTN1Q16799 776 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
VAMP4-202ENST00000367740 SH3PXD2AQ5TCZ1 1133 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 PDXDC1Q6P996 788 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 SLC7A3Q8WY07 619 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
VAMP4-202ENST00000367740 VPS45Q9NRW7 570 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 BMP2KQ9NSY1 1161 aaPredicted RBP16.32■□□□□ 0.2
VAMP4-202ENST00000367740 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 BPTFQ12830 3046 aa16.32■□□□□ 0.2
VAMP4-202ENST00000367740 WDR27A2RRH5 827 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 PTPN2P17706 415 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 SOX9P48436 509 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 MLLT6P55198 1093 aaPredicted RBP16.31■□□□□ 0.2
VAMP4-202ENST00000367740 TUSC3Q13454 348 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 AMHR2Q16671 573 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 SOWAHCQ53LP3 525 aaPredicted RBP16.31■□□□□ 0.2
VAMP4-202ENST00000367740 HACE1Q8IYU2 909 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 DEPDC1BQ8WUY9 529 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 ZSWIM3Q96MP5 696 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
VAMP4-202ENST00000367740 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 NUP205Q92621 2012 aa16.31■□□□□ 0.2
VAMP4-202ENST00000367740 ARHGEF37A1IGU5 675 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 C4orf47A7E2U8 309 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 ZNF263O14978 683 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 ARF4P18085 180 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-202ENST00000367740 VIPR2P41587 438 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 PXNP49023 591 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-202ENST00000367740 PCBP1Q15365 356 aaKnown RBP eCLIP16.3■□□□□ 0.26e-6■□□□□ 9.5
VAMP4-202ENST00000367740 TXNDC11Q6PKC3 985 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.3■□□□□ 0.2
VAMP4-202ENST00000367740 SYNE3Q6ZMZ3 975 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 SMARCD2Q92925 531 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 CORO1BQ9BR76 489 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 C6orf50Q9HD87 102 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 BRPF3Q9ULD4 1205 aa16.3■□□□□ 0.2
VAMP4-202ENST00000367740 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 MICAL2O94851 1124 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 CDC27P30260 824 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 PSMC5P62195 406 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 ELAVL2Q12926 359 aaKnown RBP16.29■□□□□ 0.2
VAMP4-202ENST00000367740 DGKKQ5KSL6 1271 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 C1orf228Q6PIY5 440 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 CDR2LQ86X02 465 aaPredicted RBP16.29■□□□□ 0.2
VAMP4-202ENST00000367740 ZC3H10Q96K80 434 aaKnown RBP16.29■□□□□ 0.2
VAMP4-202ENST00000367740 PARP2Q9UGN5 583 aa16.29■□□□□ 0.2
VAMP4-202ENST00000367740 PTGESO14684 152 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 ZBTB43O43298 467 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 EXTL3O43909 919 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 NPTXRO95502 500 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 LRG1P02750 347 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 CEACAM1P13688 526 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 FGFR3P22607 806 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 RFC5P40937 340 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 PTENP60484 403 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 MBTD1Q05BQ5 628 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 CCINQ13939 588 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 EMC2Q15006 297 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 NAB2Q15742 525 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 MFSD6LQ8IWD5 586 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 CSGALNACT1Q8TDX6 532 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 CEP170P1Q96L14 293 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 TRPV4Q9HBA0 871 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 WRAP73Q9P2S5 460 aaPredicted RBP16.28■□□□□ 0.2
VAMP4-202ENST00000367740 NEUROG3Q9Y4Z2 214 aa16.28■□□□□ 0.2
VAMP4-202ENST00000367740 NUP210Q8TEM1 1887 aaPredicted RBP16.27■□□□□ 0.2
VAMP4-202ENST00000367740 CCDC163A0A0D9SF12 145 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 LNP1A1A4G5 178 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 MYBPHLA2RUH7 354 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 GOLGA8AA7E2F4 631 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 GOLGA8BA8MQT2 603 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 SPECC1L-ADORA2AF8WAN1 911 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 INO80B-WBP1J3KQ70 363 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 ZNF197O14709 1029 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 SLC27A2O14975 620 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 ASAP2O43150 1006 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 B4GALT5O43286 388 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 MOSPD3O75425 235 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 IGFBP6P24592 240 aaPredicted RBP16.27■□□□□ 0.2
VAMP4-202ENST00000367740 CTHP32929 405 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 Q4G0T1 1027 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 KIAA1211LQ6NV74 962 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 PKN3Q6P5Z2 889 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 SLC27A1Q6PCB7 646 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 PDZD4Q76G19 769 aaPredicted RBP16.27■□□□□ 0.2
VAMP4-202ENST00000367740 IFNLR1Q8IU57 520 aaPredicted RBP16.27■□□□□ 0.2
VAMP4-202ENST00000367740 EXOC8Q8IYI6 725 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 RSPRY1Q96DX4 576 aa16.27■□□□□ 0.2
VAMP4-202ENST00000367740 KIF12Q96FN5 646 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms