RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 PHF24Q9UPV7 400 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 LUC7L2Q9Y383 392 aaKnown RBP10.3□□□□□ -0.76
VTA1-201ENST00000367621 COQ4Q9Y3A0 265 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 SIP14410 1827 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 SCN10AQ9Y5Y9 1956 aa10.3□□□□□ -0.76
VTA1-201ENST00000367621 CHRNA1P02708 482 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 C4BPAP04003 597 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 MCF2P10911 925 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 HSPA8P11142 646 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 HARSP12081 509 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 TRIM21P19474 475 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 EIF4BP23588 611 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 MRPS6P82932 125 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 MYL7Q01449 175 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 PTPN11Q06124 597 aaPredicted RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 ENOX2Q16206 610 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 UBXN11Q5T124 520 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 PDXDC1Q6P996 788 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 GJB7Q6PEY0 223 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 TRIM65Q6PJ69 517 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 SV2AQ7L0J3 742 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 CCDC112Q8NEF3 446 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 TAS1R2Q8TE23 839 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 BAG1Q99933 345 aaPredicted RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 CELF4Q9BZC1 486 aaKnown RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 SENP6Q9GZR1 1112 aaPredicted RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 KCND1Q9NSA2 647 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 RBAKQ9NYW8 714 aaPredicted RBP10.29□□□□□ -0.76
VTA1-201ENST00000367621 GCNT4Q9P109 453 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 CEP72Q9P209 647 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 FBXL5Q9UKA1 691 aa10.29□□□□□ -0.76
VTA1-201ENST00000367621 A0A1W2PQ45 241 aaPredicted RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 A0A1W2PQY0 241 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 STX10O60499 249 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 N4BP1O75113 896 aaKnown RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 VNN1O95497 513 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 STAG3L1P0CL83 205 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 DLATP10515 647 aaKnown RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 CCL5P13501 91 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 UCHL3P15374 230 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 KCNJ6P48051 423 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 MXI1P50539 228 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 CDK7P50613 346 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 JAM2P57087 298 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 POLR2FP61218 127 aaKnown RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 MTF1Q14872 753 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 PCBP1Q15365 356 aaKnown RBP eCLIP10.28□□□□□ -0.76
VTA1-201ENST00000367621 PTGISQ16647 500 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 ZNF568Q3ZCX4 644 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 FAM47CQ5HY64 1035 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 LMBRD2Q68DH5 695 aaPredicted RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 KRT39Q6A163 491 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 RAD9BQ6WBX8 426 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 FAM228AQ86W67 206 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 THNSL1Q8IYQ7 743 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 ARRDC4Q8NCT1 418 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 SCLT1Q96NL6 688 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 CHP1Q99653 195 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 CGRRF1Q99675 332 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 TCHPQ9BT92 498 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 GPR88Q9GZN0 384 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 TRMT13Q9NUP7 481 aaKnown RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 OGDHLQ9ULD0 1010 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 PLAGL2Q9UPG8 496 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 GINS2Q9Y248 185 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 NOC2LQ9Y3T9 749 aaKnown RBP10.28□□□□□ -0.76
VTA1-201ENST00000367621 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 CDY2AQ9Y6F7 541 aa10.28□□□□□ -0.76
VTA1-201ENST00000367621 MYH11P35749 1972 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 SOWAHDA6NJG2 315 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 LRRC53A6NM62 1247 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 ZNF500O60304 480 aaPredicted RBP10.27□□□□□ -0.77
VTA1-201ENST00000367621 GDF9O60383 454 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 B4GALT4O60513 344 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 TPM1P09493 284 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 CLTAP09496 248 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 MATR3P43243 847 aaKnown RBP eCLIP10.27□□□□□ -0.77
VTA1-201ENST00000367621 CDK17Q00537 523 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 POU5F1Q01860 360 aaKnown RBP10.27□□□□□ -0.77
VTA1-201ENST00000367621 PTK7Q13308 1070 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
VTA1-201ENST00000367621 SLC10A6Q3KNW5 377 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 ZACNQ401N2 412 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 FAM26DQ5JW98 314 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 TDRD10Q5VZ19 366 aaKnown RBP10.27□□□□□ -0.77
VTA1-201ENST00000367621 HGSNATQ68CP4 663 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 LIAT1Q6ZQX7 453 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 TOGARAM2Q6ZUX3 1019 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 RRAGAQ7L523 313 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 CATSPER4Q7RTX7 472 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 EFCAB13Q8IY85 973 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 OLIG1Q8TAK6 271 aa10.27□□□□□ -0.77
VTA1-201ENST00000367621 CXorf38Q8TB03 319 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms