RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 PDCD11Q14690 1871 aaKnown RBP13.22□□□□□ -0.29
CAPN9-203ENST00000366666 ITIH6Q6UXX5 1313 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 ZSCAN12O43309 604 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 AKAP5P24588 427 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 CLDN10P78369 228 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 MYL7Q01449 175 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 LRRC26Q2I0M4 334 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 SV2AQ7L0J3 742 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 TC2NQ8N9U0 490 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
CAPN9-203ENST00000366666 ERVK-5Q9HDB9 667 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 TANC1Q9C0D5 1861 aa13.22□□□□□ -0.29
CAPN9-203ENST00000366666 LACTBL1A8MY62 500 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 TNNI1P19237 187 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 EN2P19622 333 aaPredicted RBP13.21□□□□□ -0.29
CAPN9-203ENST00000366666 PPP2R3AQ06190 1150 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 EXOC3L4Q17RC7 722 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 TDRD10Q5VZ19 366 aaKnown RBP13.21□□□□□ -0.29
CAPN9-203ENST00000366666 TWF2Q6IBS0 349 aaKnown RBP13.21□□□□□ -0.29
CAPN9-203ENST00000366666 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 SMG8Q8ND04 991 aaKnown RBP13.21□□□□□ -0.29
CAPN9-203ENST00000366666 TAS1R2Q8TE23 839 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 UBXN4Q92575 508 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 ADPGKQ9BRR6 497 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 ALPK3Q96L96 1907 aa13.21□□□□□ -0.29
CAPN9-203ENST00000366666 GOLGA6L9A6NEM1 432 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 NBNO60934 754 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 NFICP08651 508 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 CAPN2P17655 700 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.3
CAPN9-203ENST00000366666 MXI1P50539 228 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 PCBP1Q15365 356 aaKnown RBP eCLIP13.21□□□□□ -0.3
CAPN9-203ENST00000366666 TRIM65Q6PJ69 517 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 C15orf39Q6ZRI6 1047 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 LRRC8DQ7L1W4 858 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 SCLYQ96I15 445 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 FNBP1Q96RU3 617 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 PPP1R12CQ9BZL4 782 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 MTMR12Q9C0I1 747 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.3
CAPN9-203ENST00000366666 KLK14Q9P0G3 267 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 ATP11BQ9Y2G3 1177 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 IPPQ9Y573 584 aa13.21□□□□□ -0.3
CAPN9-203ENST00000366666 VNN1O95497 513 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 C4BPAP04003 597 aaKnown RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 CLTAP09496 248 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 IBSPP21815 317 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 AXLP30530 894 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GRM5P41594 1212 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 CLCN6P51797 869 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 PAK2Q13177 524 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 TCTN1Q2MV58 587 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 EPC2Q52LR7 807 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 ARHGAP29Q52LW3 1261 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GBP6Q6ZN66 633 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 ZMAT2Q96NC0 199 aaKnown RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 CGRRF1Q99675 332 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 TRIM6Q9C030 488 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 WNT8AQ9H1J5 351 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GANQ9H2C0 597 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 C11orf49Q9H6J7 331 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 NLRC4Q9NPP4 1024 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 MROH7Q68CQ1 1323 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 EFCAB8A8MWE9 144 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 RECQL4O94761 1208 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 CST3P01034 146 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 AFF1P51825 1210 aaKnown RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GUCY2FP51841 1108 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 CCL23P55773 120 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 DCAF4L1Q3SXM0 396 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GLRA4Q5JXX5 417 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 JADE1Q6IE81 842 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 PHLDB3Q6NSJ2 640 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 RTN4RL1Q86UN2 441 aaPredicted RBP13.2□□□□□ -0.3
CAPN9-203ENST00000366666 REXO1L1PQ8IX06 675 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 MNS1Q8NEH6 495 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 LPPQ93052 612 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 ACAP3Q96P50 834 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 TMEM106CQ9BVX2 250 aa13.2□□□□□ -0.3
CAPN9-203ENST00000366666 GTPBP10A4D1E9 387 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 GPR182O15218 404 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 ARHGAP6O43182 974 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 MFAP3LO75121 409 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 ZRANB2O95218 330 aaKnown RBP eCLIP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 RPLP2P05387 115 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 PNMA6AP0CW24 399 aaPredicted RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 SELPP16109 830 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 CYP2C18P33260 490 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 POLR2FP61218 127 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 TFAMQ00059 246 aaKnown RBP13.19□□□□□ -0.3
CAPN9-203ENST00000366666 DSC3Q14574 896 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 ZACNQ401N2 412 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 KRT39Q6A163 491 aa13.19□□□□□ -0.3
CAPN9-203ENST00000366666 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms