RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 BCO2Q9BYV7 579 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 CDY1Q9Y6F8 540 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 GPR179Q6PRD1 2367 aa23.25■■□□□ 1.31
CD47-202ENST00000361309 RBM25P49756 843 aaKnown RBP23.24■■□□□ 1.31
CD47-202ENST00000361309 GUCY1B3Q02153 619 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 NT5DC1Q5TFE4 455 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 CD300LGQ6UXG3 332 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 DCLK2Q8N568 766 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 RUBCNQ92622 972 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 SPATA6Q9NWH7 488 aaPredicted RBP23.24■■□□□ 1.31
CD47-202ENST00000361309 KCNH3Q9ULD8 1083 aa23.24■■□□□ 1.31
CD47-202ENST00000361309 FAM170BA6NMN3 283 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 CD72P21854 359 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 TKTP29401 623 aaKnown RBP23.23■■□□□ 1.31
CD47-202ENST00000361309 PFKPQ01813 784 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 ZNF174Q15697 407 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 ATF7IP2Q5U623 682 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 DDX27Q96GQ7 796 aaKnown RBP23.23■■□□□ 1.31
CD47-202ENST00000361309 IFT74Q96LB3 600 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 GOLGA2P5Q9HBQ8 144 aa23.23■■□□□ 1.31
CD47-202ENST00000361309 I3L4J1 428 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 LAMTOR5O43504 91 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 OR52Z1P0C646 297 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 BRCC3P46736 316 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 EFNA5P52803 228 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 SAFBQ15424 915 aaKnown RBP eCLIP23.22■■□□□ 1.31
CD47-202ENST00000361309 UPP1Q16831 310 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 RTL10Q7L3V2 364 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 SUMF1Q8NBK3 374 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 C3orf58Q8NDZ4 430 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 UROC1Q96N76 676 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 OSBPL6Q9BZF3 934 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 LTB4R2Q9NPC1 389 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 MRPS23Q9Y3D9 190 aaKnown RBP23.22■■□□□ 1.31
CD47-202ENST00000361309 BACE2Q9Y5Z0 518 aa23.22■■□□□ 1.31
CD47-202ENST00000361309 PDCD11Q14690 1871 aaKnown RBP23.22■■□□□ 1.31
CD47-202ENST00000361309 TRAPPC3O43617 180 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 KINO60870 393 aaKnown RBP23.21■■□□□ 1.31
CD47-202ENST00000361309 ST3GAL1Q11201 340 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 ECM1Q16610 540 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 ZNF528Q3MIS6 628 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 ANKS3Q6ZW76 656 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 DGLUCYQ7Z3D6 616 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 MCRS1Q96EZ8 462 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 MYH11P35749 1972 aa23.21■■□□□ 1.31
CD47-202ENST00000361309 RHOP08100 348 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 NEK4P51957 841 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 CSTF1Q05048 431 aaKnown RBP23.2■■□□□ 1.3
CD47-202ENST00000361309 SOX4Q06945 474 aaPredicted RBP23.2■■□□□ 1.3
CD47-202ENST00000361309 SLC5A9Q2M3M2 681 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 TPRG1Q6ZUI0 275 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 CEP120Q8N960 986 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 KIFAP3Q92845 792 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 PLA2G2FQ9BZM2 168 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 BHMT2Q9H2M3 363 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 FBXO4Q9UKT5 387 aa23.2■■□□□ 1.3
CD47-202ENST00000361309 F5P12259 2224 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 SMIM28A0A1B0GU29 152 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 MED19A0JLT2 244 aaPredicted RBP23.19■■□□□ 1.3
CD47-202ENST00000361309 K7ERI5 159 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 MUTP22033 750 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 CCT6AP40227 531 aaKnown RBP23.19■■□□□ 1.3
CD47-202ENST00000361309 ZBTB41Q5SVQ8 909 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 HAUS3Q68CZ6 603 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 POTEHQ6S545 545 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 APBB1IPQ7Z5R6 666 aaPredicted RBP23.19■■□□□ 1.3
CD47-202ENST00000361309 GDE1Q9NZC3 331 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 DAXXQ9UER7 740 aaPredicted RBP23.19■■□□□ 1.3
CD47-202ENST00000361309 TNFSF13BQ9Y275 285 aa23.19■■□□□ 1.3
CD47-202ENST00000361309 ECI2O75521 394 aa23.18■■□□□ 1.3
CD47-202ENST00000361309 ROR1Q01973 937 aa23.18■■□□□ 1.3
CD47-202ENST00000361309 ORC2Q13416 577 aaPredicted RBP23.18■■□□□ 1.3
CD47-202ENST00000361309 PUM1Q14671 1186 aaKnown RBP eCLIP23.18■■□□□ 1.3
CD47-202ENST00000361309 ZNF461Q8TAF7 563 aa23.18■■□□□ 1.3
CD47-202ENST00000361309 TICRRQ7Z2Z1 1910 aa23.18■■□□□ 1.3
CD47-202ENST00000361309 ARHGEF37A1IGU5 675 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 LRG1P02750 347 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 CEBPBP17676 345 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 PTPN2P17706 415 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 TARSP26639 723 aaKnown RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 ELF1P32519 619 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 GRM5P41594 1212 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 MAGEA9P43362 315 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 YARSP54577 528 aaKnown RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 OSTNP61366 133 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 TTC38Q5R3I4 469 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 VARS2Q5ST30 1063 aaKnown RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 TANGO2Q6ICL3 276 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 SLC8B1Q6J4K2 584 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 ALKAL1Q6UXT8 129 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 C8orf76Q96K31 380 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 ACO2Q99798 780 aaKnown RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 CCDC94Q9BW85 323 aaPredicted RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 CDT1Q9H211 546 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 AVENQ9NQS1 362 aaPredicted RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 HEBP1Q9NRV9 189 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 TOPORSQ9NS56 1045 aaPredicted RBP23.17■■□□□ 1.3
CD47-202ENST00000361309 KIAA1024Q9UPX6 916 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 NCOR2Q9Y618 2525 aa23.17■■□□□ 1.3
CD47-202ENST00000361309 WDR27A2RRH5 827 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms