RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 SLFN12LQ6IEE8 588 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 HOOK3Q86VS8 718 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 CPNE8Q86YQ8 564 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 MCOLN2Q8IZK6 566 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 CHST13Q8NET6 341 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 RABEP2Q9H5N1 569 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 ATXN2Q99700 1313 aaKnown RBP28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 HLA-DRAP01903 254 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 C4BPAP04003 597 aaKnown RBP28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 ATP4AP20648 1035 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 RPL21P46778 160 aaKnown RBP28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 IFFO1Q0D2I5 559 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 SKIDA1Q1XH10 827 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 B4GALNT4Q76KP1 1039 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 ELMO3Q96BJ8 720 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 EPB41L4BQ9H329 900 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 MTRF1LQ9UGC7 380 aaKnown RBP28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 ANAPC7Q9UJX3 599 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 AFG3L2Q9Y4W6 797 aa28.21■■■□□ 2.11
CUEDC1-201ENST00000360238 TNNI1P19237 187 aa28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 MAPK4P31152 587 aa28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 PIK3CAP42336 1068 aa28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 NLRP11P59045 1033 aaKnown RBP28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 TDRD10Q5VZ19 366 aaKnown RBP28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 SPATS2Q86XZ4 545 aaKnown RBP28.2■■■□□ 2.11
CUEDC1-201ENST00000360238 SORBS3O60504 671 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 RARAP10276 462 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 MAGEA9P43362 315 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 PPP2R2AP63151 447 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 CYFIP1Q7L576 1253 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 ASAP3Q8TDY4 903 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 SLCO2A1Q92959 643 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 PAGR1Q9BTK6 254 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 LRRC19Q9H756 370 aa28.2■■■□□ 2.1
CUEDC1-201ENST00000360238 PASKQ96RG2 1323 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 ZNF541Q9H0D2 1346 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 TCRBV7S2A1N4TA0A589 114 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 LDHAP00338 332 aaKnown RBP28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 GLRA2P23416 452 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 ARL2P36404 184 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 CENPCQ03188 943 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 SH3D19Q5HYK7 790 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 CCDC105Q8IYK2 499 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 DEPTORQ8TB45 409 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 ZNF526Q8TF50 670 aaPredicted RBP28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 TMEM143Q96AN5 459 aa28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 NIFKQ9BYG3 293 aaKnown RBP28.19■■■□□ 2.1
CUEDC1-201ENST00000360238 FSCN2O14926 492 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 SLC1A1P43005 524 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 SLC7A3Q8WY07 619 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 BCCIPQ9P287 314 aaKnown RBP eCLIP28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 NOVA2Q9UNW9 492 aaKnown RBP28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 IGKV6D-21A0A0A0MT36 114 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 CYP1A1P04798 512 aaPredicted RBP28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 DENND2CQ68D51 928 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 LMBRD2Q68DH5 695 aaPredicted RBP28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 CRELD2Q6UXH1 353 aaPredicted RBP28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 TLCD1Q96CP7 247 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 FAM169AQ9Y6X4 670 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 MROH7Q68CQ1 1323 aa28.18■■■□□ 2.1
CUEDC1-201ENST00000360238 ODF2Q5BJF6 829 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 TRIM72Q6ZMU5 477 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 FAM84AQ96KN4 292 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 CEP89Q96ST8 783 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 RBAKQ9NYW8 714 aaPredicted RBP28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 LRRIQ4A6NIV6 560 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 K7ERI5 159 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 RFC5P40937 340 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 NSFP46459 744 aaKnown RBP28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 ACOT2P49753 483 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 WNT7BP56706 349 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 NLRP14Q86W24 1093 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 TRPM4Q8TD43 1214 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 MAIP1Q8WWC4 291 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 HAPLN2Q9GZV7 340 aa28.17■■■□□ 2.1
CUEDC1-201ENST00000360238 PTPRJQ12913 1337 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 VNN1O95497 513 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 ECEL1O95672 775 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 FAM107AO95990 144 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 PAEPP09466 180 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 ACO1P21399 889 aaKnown RBP28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 CUL2Q13617 745 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 MYCBPAPQ8TBZ2 947 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 ART4Q93070 314 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 CGRRF1Q99675 332 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 MTFR1LQ9H019 292 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 GGA3Q9NZ52 723 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 CALCAP01258 141 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 MAGOHP61326 146 aaKnown RBP28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 SLMAPQ14BN4 828 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 MON1BQ7L1V2 547 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 CROCCP2Q86T23 111 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 C3orf20Q8ND61 904 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 ZNF473Q8WTR7 871 aaKnown RBP28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 TMEM134Q9H6X4 195 aa28.16■■■□□ 2.1
CUEDC1-201ENST00000360238 LRRC37A2A6NM11 1700 aa28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 CLDN3O15551 220 aa28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 RRM1P23921 792 aa28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 ALDH5A1P51649 535 aaPredicted RBP28.15■■■□□ 2.1
CUEDC1-201ENST00000360238 ANKRD35Q8N283 1001 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms