RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 DUSP28Q4G0W2 176 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 DAAM2Q86T65 1068 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 SYCP3Q8IZU3 236 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 PPTC7Q8NI37 304 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 OLIG1Q8TAK6 271 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 RFFLQ8WZ73 363 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 ACCSQ96QU6 501 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 NTPCRQ9BSD7 190 aaKnown RBP21.82■■□□□ 1.08
CBWD3-201ENST00000360171 SMARCAD1Q9H4L7 1026 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 KMT5AQ9NQR1 393 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 AMFRQ9UKV5 643 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 EVPLQ92817 2033 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 TMEM253P0C7T8 217 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 PSMC2P35998 433 aaKnown RBP21.82■■□□□ 1.08
CBWD3-201ENST00000360171 RFC5P40937 340 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 POU5F1Q01860 360 aaKnown RBP21.82■■□□□ 1.08
CBWD3-201ENST00000360171 CLUL1Q15846 466 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 SWT1Q5T5J6 900 aaKnown RBP21.82■■□□□ 1.08
CBWD3-201ENST00000360171 HS2ST1Q7LGA3 356 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 ASAP3Q8TDY4 903 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 SLC7A3Q8WY07 619 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 STK33Q9BYT3 514 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 NEUROG2Q9H2A3 272 aa21.82■■□□□ 1.08
CBWD3-201ENST00000360171 LGALS2P05162 132 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 PAEPP09466 180 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 SOX5P35711 763 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 SMTNP53814 917 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 GALCP54803 685 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 TMC3Q7Z5M5 1100 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 SYT11Q9BT88 431 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 DMAC2Q9NW81 257 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 DENND3A2RUS2 1198 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 EVI5O60447 810 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 ARL2P36404 184 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 RGS2P41220 211 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 NOGQ13253 232 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 C6orf89Q6UWU4 347 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 SLC17A8Q8NDX2 589 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 U2AF1L4Q8WU68 220 aaKnown RBP21.81■■□□□ 1.08
CBWD3-201ENST00000360171 CAPNS2Q96L46 248 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 ARHGAP39Q9C0H5 1083 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 TMEM206Q9H813 350 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 AMACRQ9UHK6 382 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 TBX20Q9UMR3 447 aa21.81■■□□□ 1.08
CBWD3-201ENST00000360171 UTP11Q9Y3A2 253 aaKnown RBP21.81■■□□□ 1.08
CBWD3-201ENST00000360171 F8VZ95 297 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 MYO1FO00160 1098 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 MAFO75444 373 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 CCDC172P0C7W6 258 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 GLRA2P23416 452 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 CYP2J2P51589 502 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 GTF2A1P52655 376 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 IQSEC1Q6DN90 963 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 DDX42Q86XP3 938 aaKnown RBP eCLIP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 LNX1Q8TBB1 728 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 SOCS4Q8WXH5 440 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 NAP1L3Q99457 506 aaPredicted RBP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 APBA2Q99767 749 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 IGHA2P01877 340 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 ZNF286BP0CG31 522 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 SLC26A2P50443 739 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 EIF3BP55884 814 aaKnown RBP21.8■■□□□ 1.08
CBWD3-201ENST00000360171 MAP4K3Q8IVH8 894 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 FAM186BQ8IYM0 893 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 TRAPPC12Q8WVT3 735 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 IFT74Q96LB3 600 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 RAB17Q9H0T7 212 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 CARD9Q9H257 536 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 RNPEPQ9H4A4 650 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 TRPC6Q9Y210 931 aa21.8■■□□□ 1.08
CBWD3-201ENST00000360171 E7EVH7 732 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 DAPK3O43293 454 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 ZNF865P0CJ78 1059 aaPredicted RBP21.79■■□□□ 1.08
CBWD3-201ENST00000360171 ITGA4P13612 1032 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 DEFB115Q30KQ5 88 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 OLFML2BQ68BL8 750 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 TAS1R3Q7RTX0 852 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 OR6J1Q8NGC5 347 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 HVCN1Q96D96 273 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 ERAP1Q9NZ08 941 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 ARHGAP28Q9P2N2 729 aa21.79■■□□□ 1.08
CBWD3-201ENST00000360171 GMNCA6NCL1 334 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 TRAPPC3O43617 180 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 HNRNPH1P31943 449 aaKnown RBP21.78■■□□□ 1.08
CBWD3-201ENST00000360171 SEC24CP53992 1094 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 PTENP60484 403 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 PPP2R2AP63151 447 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 TNFAIP2Q03169 654 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 SLC9A9Q8IVB4 645 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 LENG1Q96BZ8 264 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-201ENST00000360171 CBWD1Q9BRT8 395 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 PPME1Q9Y570 386 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 CAPN7Q9Y6W3 813 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 DDX3YO15523 660 aaKnown RBP21.78■■□□□ 1.08
CBWD3-201ENST00000360171 TTI1O43156 1089 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 BUB1BO60566 1050 aaPredicted RBP21.78■■□□□ 1.08
CBWD3-201ENST00000360171 PPFIA2O75334 1257 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 MMP3P08254 477 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 RFX1P22670 979 aa21.78■■□□□ 1.08
CBWD3-201ENST00000360171 HPDP32754 393 aaPredicted RBP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms