RNA–Protein interactions for RNA: ENST00000359597.8

TP53-202, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-202ENST00000359597 TMEM191BP0C7N4 346 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 TNNI1P19237 187 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 CASP4P49662 377 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 MARSP56192 900 aaKnown RBP12.62□□□□□ -0.39
TP53-202ENST00000359597 ZNF445P59923 1031 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 BFSP1Q12934 665 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 GLRA4Q5JXX5 417 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 SPOUT1Q5T280 376 aaKnown RBP12.62□□□□□ -0.39
TP53-202ENST00000359597 TMCO2Q7Z6W1 182 aaPredicted RBP12.62□□□□□ -0.39
TP53-202ENST00000359597 ANKRD20A12PQ8NF67 263 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 BEST2Q8NFU1 509 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 ANKRD36BP1Q96IX9 119 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 UROC1Q96N76 676 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 PDE11AQ9HCR9 933 aa12.62□□□□□ -0.39
TP53-202ENST00000359597 R3HCC1Q9Y3T6 440 aaKnown RBP12.62□□□□□ -0.39
TP53-202ENST00000359597 PTGESO14684 152 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 TPM2P07951 284 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 DLATP10515 647 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 LAG3P18627 525 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 CYP3A5P20815 502 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 EEF1GP26641 437 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 ALDH7A1P49419 539 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 GATMP50440 423 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 VAMP7P51809 220 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 SMAD3P84022 425 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 TFAMQ00059 246 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 SPAG1Q07617 926 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 TUSC3Q13454 348 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 TCERG1LQ5VWI1 586 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 JADE1Q6IE81 842 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 AOPEPQ8N6M6 819 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 ZSWIM2Q8NEG5 633 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 CCDC127Q96BQ5 260 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 EEF2KMTQ96G04 330 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 DDX27Q96GQ7 796 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 SAMD11Q96NU1 681 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 PPP1R10Q96QC0 940 aaKnown RBP12.61□□□□□ -0.39
TP53-202ENST00000359597 CGRRF1Q99675 332 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 TMEM175Q9BSA9 504 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 TRIP11Q15643 1979 aa12.61□□□□□ -0.39
TP53-202ENST00000359597 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 N4BP1O75113 896 aaKnown RBP12.6□□□□□ -0.39
TP53-202ENST00000359597 ZC3H11AO75152 810 aaKnown RBP eCLIP12.6□□□□□ -0.39
TP53-202ENST00000359597 NFICP08651 508 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 GTF2H1P32780 548 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
TP53-202ENST00000359597 PPM1AP35813 382 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 DSC1Q08554 894 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 LRIT3Q3SXY7 679 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 DCAF17Q5H9S7 520 aaPredicted RBP12.6□□□□□ -0.39
TP53-202ENST00000359597 GSTCDQ8NEC7 633 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 CNOT6LQ96LI5 555 aaKnown RBP12.6□□□□□ -0.39
TP53-202ENST00000359597 INTS13Q9NVM9 706 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 COLQQ9Y215 455 aaPredicted RBP12.6□□□□□ -0.39
TP53-202ENST00000359597 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
TP53-202ENST00000359597 GBF1Q92538 1859 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 LRRIQ3A6PVS8 624 aaPredicted RBP12.59□□□□□ -0.39
TP53-202ENST00000359597 RBAK-RBAKDNI3L0D1 243 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 PAX3P23760 479 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 MTIF2P46199 727 aaKnown RBP12.59□□□□□ -0.39
TP53-202ENST00000359597 RABGGTBP53611 331 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 CLDN10P78369 228 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 CREBRFQ8IUR6 639 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
TP53-202ENST00000359597 ZNF558Q96NG5 402 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 MED15Q96RN5 788 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 COLEC11Q9BWP8 271 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 PBX4Q9BYU1 374 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 SLC28A3Q9HAS3 691 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 DPP3Q9NY33 737 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 STK39Q9UEW8 545 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 ITGA11Q9UKX5 1188 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 PLAGL2Q9UPG8 496 aa12.59□□□□□ -0.39
TP53-202ENST00000359597 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.59□□□□□ -0.39
TP53-202ENST00000359597 MRPL42Q9Y6G3 142 aaKnown RBP12.59□□□□□ -0.39
TP53-202ENST00000359597 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
TP53-202ENST00000359597 GRXCR1A8MXD5 290 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 MEFVO15553 781 aaPredicted RBP12.58□□□□□ -0.4
TP53-202ENST00000359597 PHACTR2O75167 634 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 ALDH2P05091 517 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 CA3P07451 260 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 CDK11BP21127 795 aaKnown RBP12.58□□□□□ -0.4
TP53-202ENST00000359597 PNPLA4P41247 253 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 OR1G1P47890 313 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 MXI1P50539 228 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 AFF1P51825 1210 aaKnown RBP12.58□□□□□ -0.4
TP53-202ENST00000359597 CETN1Q12798 172 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 BIRC3Q13489 604 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 ZBTB6Q15916 424 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 CDKAL1Q5VV42 579 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 PPP2R2DQ66LE6 453 aa12.58□□□□□ -0.4
TP53-202ENST00000359597 FAM109BQ6ICB4 259 aaPredicted RBP12.58□□□□□ -0.4
TP53-202ENST00000359597 TRIM59Q8IWR1 403 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms