RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ZNF302Q9NR11 478 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 RGL1Q9NZL6 768 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 MYOM2P54296 1465 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 UHRF1BP1Q6BDS2 1440 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 ZC3H4Q9UPT8 1303 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 CYP26A1O43174 497 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 PHKA2P46019 1235 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 KNOP1Q1ED39 458 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 C16orf89Q6UX73 402 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 KLF6Q99612 283 aaPredicted RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 KIAA0232Q92628 1395 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 ZNF197O14709 1029 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 KLHL18O94889 574 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 RGS7P49802 495 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 JAK3P52333 1124 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 TPI1P60174 286 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 BTBD8Q5XKL5 378 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 APOL5Q9BWW9 433 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 DLGAP2Q9P1A6 1054 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 PRG3Q9Y2Y8 225 aaPredicted RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 EMSYQ7Z589 1322 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 CENPPQ6IPU0 288 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 VN1R5Q7Z5H4 357 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 TLK2Q86UE8 772 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 MYL2P10916 166 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 FCER1AP12319 257 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 PLA2G4AP47712 749 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 ABCE1P61221 599 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 STX3Q13277 289 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 USP10Q14694 798 aaKnown RBP11.76□□□□□ -0.53
COL11A1-202ENST00000358392 CYB5R4Q7L1T6 521 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 NLRP9Q7RTR0 991 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 VMP1Q96GC9 406 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 TJP2Q9UDY2 1190 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 STAP1Q9ULZ2 295 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 SESN1Q9Y6P5 492 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 MLH3Q9UHC1 1453 aa11.76□□□□□ -0.53
COL11A1-202ENST00000358392 AVPR1AP37288 418 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 NCALDP61601 193 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 VSNL1P62760 191 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 CCDC149Q6ZUS6 474 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RAB42Q8N4Z0 105 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 HPS3Q969F9 1004 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RNPC3Q96LT9 517 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 PTPRKQ15262 1439 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 TOMM70O94826 608 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 IFNAR1P17181 557 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RFX3P48380 749 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 SEC16BQ96JE7 1060 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 DIABLOQ9NR28 239 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 GID8Q9NWU2 228 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 SCN3BQ9NY72 215 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 GABBR1Q9UBS5 961 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 TRIM10Q9UDY6 481 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 hCG_1984214I3L0E3 225 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 PARNO95453 639 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 SKIV2LQ15477 1246 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 C10orf53Q8N6V4 93 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 GRAMD1AQ96CP6 724 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ERP27Q96DN0 273 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 PLEKHA5Q9HAU0 1116 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ARHGEF38Q9NXL2 777 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 TTC26A0AVF1 554 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 BAG6P46379 1132 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 CNDP1Q96KN2 507 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 COQ7Q99807 217 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 CXorf56Q9H5V9 222 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 CHMP2BQ9UQN3 213 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ERBB4Q15303 1308 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 DDHD2O94830 711 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RC3H1Q5TC82 1133 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 MICU2Q8IYU8 434 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 TOPORSQ9NS56 1045 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 RBAKQ9NYW8 714 aaPredicted RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 MYBL1P10243 752 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ACTR2P61160 394 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
COL11A1-202ENST00000358392 ZNF786Q8N393 782 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 EFHBQ8N7U6 833 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 CD248Q9HCU0 757 aa11.75□□□□□ -0.53
COL11A1-202ENST00000358392 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 FOXN1O15353 648 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 CDH2P19022 906 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 ELMSAN1Q6PJG2 1045 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 PTPRN2Q92932 1015 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 GLMNQ92990 594 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TUBGCP3Q96CW5 907 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 FAM187AA6NFU0 413 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 PER1O15534 1290 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms