RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 PPM1LQ5SGD2 360 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 KRT79Q5XKE5 535 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 RINT1Q6NUQ1 792 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 PARM1Q6UWI2 310 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 ITFG1Q8TB96 612 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 SLC7A14Q8TBB6 771 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 FGF14Q92915 247 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 UROC1Q96N76 676 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 TARS2Q9BW92 718 aaKnown RBP11.23□□□□□ -0.61
LINC01560-201ENST00000357412 RAB34Q9BZG1 259 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 TMEM134Q9H6X4 195 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 SLC2A4RGQ9NR83 387 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.23□□□□□ -0.61
LINC01560-201ENST00000357412 CDH7Q9ULB5 785 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 CA14Q9ULX7 337 aa11.23□□□□□ -0.61
LINC01560-201ENST00000357412 ZFP37Q9Y6Q3 630 aaPredicted RBP11.23□□□□□ -0.61
LINC01560-201ENST00000357412 I3L4J1 428 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 LAD1O00515 517 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 TKTP29401 623 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 MYH9P35579 1960 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 PRPHP41219 470 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 BRCC3P46736 316 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 OSTNP61366 133 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 GPC5P78333 572 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 AXDND1Q5T1B0 1012 aaPredicted RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 PHLDB3Q6NSJ2 640 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 DTHD1Q6ZMT9 781 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 PHLPP2Q6ZVD8 1323 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 LOXHD1Q8IVV2 1947 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 FGF13Q92913 245 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 SNX27Q96L92 541 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 ZMAT2Q96NC0 199 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 NTPCRQ9BSD7 190 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 CCDC94Q9BW85 323 aaPredicted RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 TBC1D17Q9HA65 648 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 ARHGEF3Q9NR81 526 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 DLGAP2Q9P1A6 1054 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 DNMT3BQ9UBC3 853 aaKnown RBP11.22□□□□□ -0.61
LINC01560-201ENST00000357412 POLIQ9UNA4 740 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 CDY1Q9Y6F8 540 aa11.22□□□□□ -0.61
LINC01560-201ENST00000357412 SFI1A8K8P3 1242 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 STK25O00506 426 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 PODXLO00592 558 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 TRAPPC3O43617 180 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 TBC1D4O60343 1298 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 XYLBO75191 536 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 MCF2P10911 925 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 KCNE1P15382 129 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 GUCY2CP25092 1073 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 VASPP50552 380 aaPredicted RBP11.21□□□□□ -0.61
LINC01560-201ENST00000357412 YARSP54577 528 aaKnown RBP11.21□□□□□ -0.61
LINC01560-201ENST00000357412 ZNF568Q3ZCX4 644 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 SLC8B1Q6J4K2 584 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 POTEHQ6S545 545 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 ANKS3Q6ZW76 656 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 RTL10Q7L3V2 364 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 SPIRE2Q8WWL2 714 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 NKD2Q969F2 451 aaPredicted RBP11.21□□□□□ -0.61
LINC01560-201ENST00000357412 DRC1Q96MC2 740 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 ACAP3Q96P50 834 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 PNMA5Q96PV4 448 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 C17orf75Q9HAS0 396 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 KMT5AQ9NQR1 393 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 TOPORSQ9NS56 1045 aaPredicted RBP11.21□□□□□ -0.61
LINC01560-201ENST00000357412 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 HCFC1R1Q9NWW0 138 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 CNTN3Q9P232 1028 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 KCNH3Q9ULD8 1083 aa11.21□□□□□ -0.61
LINC01560-201ENST00000357412 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
LINC01560-201ENST00000357412 GVINP1Q7Z2Y8 2422 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 SLC16A4O15374 487 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 DCNP07585 359 aaKnown RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 GLULP15104 373 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 STARD6P59095 220 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 ATP2C1P98194 919 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 ROR1Q01973 937 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 MRPL58Q14197 206 aaKnown RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 PABPC1LQ4VXU2 614 aaKnown RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 RILPL1Q5EBL4 403 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 HYIQ5T013 277 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 MPZL3Q6UWV2 235 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 SYT2Q8N9I0 419 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 TMEM161BQ8NDZ6 487 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 C18orf25Q96B23 403 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
LINC01560-201ENST00000357412 TCHPQ9BT92 498 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 SIT1Q9Y3P8 196 aa11.2□□□□□ -0.62
LINC01560-201ENST00000357412 ARHGEF37A1IGU5 675 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 WDR27A2RRH5 827 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 SYN3O14994 580 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 TOM1L1O75674 476 aa11.19□□□□□ -0.62
LINC01560-201ENST00000357412 ABLIM3O94929 683 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms