RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 PRKCBP05771 671 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 NMT1P30419 496 aaKnown RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 P3H1Q32P28 736 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 EP400NLQ6ZTU2 488 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 SAMD3Q8N6K7 520 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 ENGASEQ8NFI3 743 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 PIP4K2CQ8TBX8 421 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 POLR3CQ9BUI4 534 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 KCNF1Q9H3M0 494 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 MEFVO15553 781 aaPredicted RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 IL18RAPO95256 599 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 MCF2P10911 925 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 GYS1P13807 737 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 MTF1Q14872 753 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 NCAPHQ15003 741 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 OLFM3Q96PB7 478 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 CHP1Q99653 195 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 REEP2Q9BRK0 252 aa12.4□□□□□ -0.42
COL9A1-202ENST00000357250 DHX35Q9H5Z1 703 aaKnown RBP12.4□□□□□ -0.42
COL9A1-202ENST00000357250 MYMKA6NI61 221 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 CYP26A1O43174 497 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SLC4A1P02730 911 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 RASA1P20936 1047 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 EIF3EP60228 445 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 CENPCQ03188 943 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 STK4Q13043 487 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 RNF219Q5W0B1 726 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 MRPL46Q9H2W6 279 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 GTSE1Q9NYZ3 720 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 G3BP2Q9UN86 482 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ADGRB2O60241 1585 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SLIT1O75093 1534 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 PDHBP11177 359 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 EEF1DP29692 281 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 FIGNQ5HY92 759 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 RPAP3Q9H6T3 665 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 VCPKMTQ9H867 229 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 EML4Q9HC35 981 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ZNRF3Q9ULT6 936 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 MAGED2Q9UNF1 606 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 GYS2P54840 703 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 PRAMEP78395 509 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 GSPT2Q8IYD1 628 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SEPT1Q8WYJ6 367 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ANKRD7Q92527 254 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 DACT3Q96B18 629 aaPredicted RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 TRIM54Q9BYV2 358 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 NSMCE4AQ9NXX6 385 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 POLLQ9UGP5 575 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ARHGAP10A1A4S6 786 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 RAD51Q06609 339 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 TBCCQ15814 346 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ZC3H18Q86VM9 953 aaKnown RBP12.39□□□□□ -0.43
COL9A1-202ENST00000357250 PARP9Q8IXQ6 854 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 FAM151AQ8WW52 585 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ULK4Q96C45 1275 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SMARCAD1Q9H4L7 1026 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 YY1AP1Q9H869 796 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 TMEM8AQ9HCN3 771 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 ZFATQ9P243 1243 aa12.39□□□□□ -0.43
COL9A1-202ENST00000357250 SNRNP35Q16560 246 aaKnown RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 AGGF1Q8N302 714 aaeCLIP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 MED15Q96RN5 788 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 GPR75-ASB3A0A0A6YYF3 556 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 CREB3O43889 395 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 GAS2O43903 313 aaKnown RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 NFIAQ12857 509 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 DNAL1Q4LDG9 190 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 SCN4BQ8IWT1 228 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 CXorf38Q8TB03 319 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 TEX12Q9BXU0 123 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 CARD9Q9H257 536 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 ECT2Q9H8V3 914 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 TRIM45Q9H8W5 580 aaPredicted RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 RGL1Q9NZL6 768 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 AK9Q5TCS8 1911 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 CNTNAP4Q9C0A0 1308 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 NNMTP40261 264 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 POLE2P56282 527 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 FRMD8P1Q9BZ68 369 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms