RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 PIGHQ14442 188 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 DMC1Q14565 340 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 AASDHQ4L235 1098 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 PLEKHM3Q6ZWE6 761 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TRIM69Q86WT6 500 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SP8Q8IXZ3 490 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PCYOX1LQ8NBM8 494 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 ZNF526Q8TF50 670 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 SCFD2Q8WU76 684 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 LPAR1Q92633 364 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 RMDN2Q96LZ7 410 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SENP7Q9BQF6 1050 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 DCP1AQ9NPI6 582 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 KRCC1Q9NPI7 259 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 ARHGEF38Q9NXL2 777 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TTC7AQ9ULT0 858 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 CPDO75976 1380 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PNPLA7Q6ZV29 1317 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 EMSYQ7Z589 1322 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TRIM49BA6NDI0 452 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 C19orf81C9J6K1 198 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TBX3O15119 743 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 MTSS1O43312 755 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 DAB1O75553 588 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SERPINI2O75830 405 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 QRICH1Q2TAL8 776 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SV2CQ496J9 727 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 XKR3Q5GH77 459 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TJAP1Q5JTD0 557 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 USP17L6PQ6QN14 398 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 HAUS6Q7Z4H7 955 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SETD3Q86TU7 594 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 CATSPER3Q86XQ3 398 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 MB21D2Q8IYB1 491 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 ARHGEF26Q96DR7 871 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 MRPL1Q9BYD6 325 aaKnown RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 SMARCAD1Q9H4L7 1026 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SYTL2Q9HCH5 934 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 H2AFY2Q9P0M6 372 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 HDAC6Q9UBN7 1215 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TRAF3IP3Q9Y228 551 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 METP08581 1390 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PITPNM2Q9BZ72 1349 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 KIF28PB7ZC32 967 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 MAP3K13O43283 966 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 ATP1A3P13637 1013 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 S100A5P33763 92 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 HPCAP84074 193 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SGSM1Q2NKQ1 1148 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 CEP55Q53EZ4 464 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 IER5Q5VY09 327 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 RAET1EQ8TD07 263 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 C18orf8Q96DM3 657 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SIK2Q9H0K1 926 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TDRD3Q9H7E2 651 aaKnown RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 RIC8BQ9NVN3 520 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 SLC30A1Q9Y6M5 507 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PHF2O75151 1096 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 ITIH2P19823 946 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 CAPZA2P47755 286 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 STAT5BP51692 787 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 NCAPHQ15003 741 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 TXNRD1Q16881 649 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 ARMC6Q6NXE6 501 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 FBXO38Q6PIJ6 1188 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PARP9Q8IXQ6 854 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PLEKHA8Q96JA3 519 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 KCNK16Q96T55 309 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PARK7Q99497 189 aaKnown RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 SLC13A1Q9BZW2 595 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 RPAP3Q9H6T3 665 aaPredicted RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 DCTN4Q9UJW0 460 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 DOLKQ9UPQ8 538 aa6.8□□□□□ -1.32
UPF2-201ENST00000356352 PIN4Q9Y237 131 aaKnown RBP6.8□□□□□ -1.32
UPF2-201ENST00000356352 POTEFA5A3E0 1075 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 SYNDIG1LA6NDD5 238 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 F5H6K3 240 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 H0Y3Z8 333 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 MEFVO15553 781 aaPredicted RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 KCNN4O15554 427 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 CLASP2O75122 1294 aaKnown RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 TADA2AO75478 443 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 NDUFS3O75489 264 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 WDR47O94967 919 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 GH1P01241 217 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 POTEIP0CG38 1075 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 TRPC1P48995 793 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 ANXA11P50995 505 aaKnown RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 ATP2C1P98194 919 aaPredicted RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 KLRC3Q07444 240 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 TP53BP2Q13625 1128 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 TOB2Q14106 344 aaPredicted RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 TMEM132DQ14C87 1099 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 C16orf72Q14CZ0 275 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 PTPN21Q16825 1174 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 POTEGQ6S5H5 508 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 POTEEQ6S8J3 1075 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 RNF135Q8IUD6 432 aa6.79□□□□□ -1.32
UPF2-201ENST00000356352 USP13Q92995 863 aaPredicted RBP6.79□□□□□ -1.32
UPF2-201ENST00000356352 DTNBP1Q96EV8 351 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms