RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CDCA7Q9BWT1 371 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 PHTF1Q9UMS5 762 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 G3V3G9 751 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 TBX3O15119 743 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 CYP11B1P15538 503 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ECE1P42892 770 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 MTFR1Q15390 333 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF568Q3ZCX4 644 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ATP13A4Q4VNC1 1196 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 IZUMO3Q5VZ72 239 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 KLF6Q99612 283 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 LRRC19Q9H756 370 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 PIDD1Q9HB75 910 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF219Q9P2Y4 722 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 NUMBLQ9Y6R0 609 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GOLGA8RI6L899 631 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 SLC16A4O15374 487 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 PEX11AO75192 247 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 LGR5O75473 907 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GH2P01242 217 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 KRT10P13645 584 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 CETN1Q12798 172 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GRIK3Q13003 919 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 BIRC2Q13490 618 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 PKN2Q16513 984 aaKnown RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 RFWD3Q6PCD5 774 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ARHGEF18Q6ZSZ5 1173 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 GBP7Q8N8V2 638 aaPredicted RBP10.8□□□□□ -0.68
PTPRA-203ENST00000356147 MAGEB18Q96M61 343 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 LRRC37BQ96QE4 947 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF577Q9BSK1 485 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 TBC1D10AQ9BXI6 508 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 DBNDD1Q9H9R9 158 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 SAYSD1Q9NPB0 183 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 LRRC4BQ9NT99 713 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
PTPRA-203ENST00000356147 EXOC1LA0A1B0GW35 172 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 A0A1W2PPM1 405 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 PSMD10O75832 226 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 FGFR1P11362 822 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 YY1P25490 414 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 RPA3P35244 121 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SOX10P56693 466 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 CDCA2Q69YH5 1023 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 PADI6Q6TGC4 694 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 CROCCP2Q86T23 111 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 TAS1R2Q8TE23 839 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 RBM15Q96T37 977 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 C10orf88Q9H8K7 445 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 BATF3Q9NR55 127 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SUGT1Q9Y2Z0 365 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SPATA31A5Q5VU36 1347 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SPATA31A7Q8IWB4 1347 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 CFHP08603 1231 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 GBP1P32455 592 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 PEX3P56589 373 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 STRN3Q13033 797 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 BLMHQ13867 455 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SETDB1Q15047 1291 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SLC1A5Q15758 541 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 P3H1Q32P28 736 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 MOXD1Q6UVY6 613 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 ZNF365Q70YC5 407 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 SH3BP5LQ7L8J4 393 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 POMGNT1Q8WZA1 660 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 CNKSR1Q969H4 720 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 ZC3H12CQ9C0D7 883 aaKnown RBP10.79□□□□□ -0.68
PTPRA-203ENST00000356147 ZCWPW1Q9H0M4 648 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 NPHS2Q9NP85 383 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 WHRNQ9P202 907 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 PRR12Q9ULL5 1215 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 UTRNP46939 3433 aa10.79□□□□□ -0.68
PTPRA-203ENST00000356147 FAM47DPA6NHR8 397 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 AP1G2O75843 785 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 GGPS1O95749 300 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 SERPINB2P05120 415 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 T-ENOLP0DO92 83 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ADRA2BP18089 450 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ITIH2P19823 946 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 CA4P22748 312 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 PRELPP51888 382 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 TAF1BQ53T94 588 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ANO7Q6IWH7 933 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 APBB1IPQ7Z5R6 666 aaPredicted RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 FAM71AQ8IYT1 594 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 DTX3LQ8TDB6 740 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 DCLK3Q9C098 648 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 GLT8D2Q9H1C3 349 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 VPS37BQ9H9H4 285 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ZFATQ9P243 1243 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 KIF13BQ9NQT8 1826 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 ATP8B3O60423 1300 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.78□□□□□ -0.68
PTPRA-203ENST00000356147 C2orf71A6NGG8 1288 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 FSCN2O14926 492 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 CDH16O75309 829 aa10.78□□□□□ -0.68
PTPRA-203ENST00000356147 GAS8O95995 478 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms