RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MAFGO15525 162 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 COMTP21964 271 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 EFNA5P52803 228 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 PSMD6Q15008 389 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ZNF571Q7Z3V5 609 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 GANCQ8TET4 914 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 SOCS4Q8WXH5 440 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 TTC17Q96AE7 1141 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 LRRC37BQ96QE4 947 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 TLR10Q9BXR5 811 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 POLR3FQ9H1D9 316 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 LMCD1Q9NZU5 365 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RNF225M0QZC1 329 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 CPP00450 1065 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 CTSHP09668 335 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 NUDT18Q6ZVK8 323 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 SH2D3AQ9BRG2 576 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 ALG6Q9Y672 507 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 CCT8L1PA6NM43 557 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 SUPT20HL2P0C7V6 817 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 MYBL2P10244 700 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 TXNRD3Q86VQ6 643 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 HSPH1Q92598 858 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RBM41Q96IZ5 413 aaKnown RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 THAP2Q9H0W7 228 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 CXorf56Q9H5V9 222 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 DCTN4Q9UJW0 460 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 RPLP2P05387 115 aaKnown RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 PSMA2P25787 234 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 PBX1P40424 430 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 GPS1Q13098 491 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 GEN1Q17RS7 908 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 TUBB6Q9BUF5 446 aa13.06□□□□□ -0.32
COLCA1-201ENST00000355430 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
COLCA1-201ENST00000355430 FOXP2O15409 715 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 MAP3K7O43318 606 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 STAG3L1P0CL83 205 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 KCNJ1P48048 391 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 FKBP1BP68106 108 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 NR1H3Q13133 447 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 EPHA7Q15375 998 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 NXNQ6DKJ4 435 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 HAUS6Q7Z4H7 955 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 PNMA5Q96PV4 448 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 HSPBP1Q9NZL4 362 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 PIN4Q9Y237 131 aaKnown RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ARL2BPQ9Y2Y0 163 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 USP15Q9Y4E8 981 aaPredicted RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 PHLPP1O60346 1717 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TBX3O15119 743 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SLC26A4O43511 780 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 RPS6KA5O75582 802 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ATP5HO75947 161 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 PDHA1P08559 390 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 RPA1P27694 616 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TRPM8Q7Z2W7 1104 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ERICH1Q86X53 443 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ZBED8Q8IZ13 594 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 PDIK1LQ8N165 341 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 NME8Q8N427 588 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 CCT6BQ92526 530 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 HEXIM2Q96MH2 286 aaKnown RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 IQANK1A0A1B0GTG1 560 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 CASP4P49662 377 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 XKR3Q5GH77 459 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TTC25Q96NG3 672 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 KLHL11Q9NVR0 708 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SCOCQ9UIL1 159 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SH3BP5O60239 455 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TOM1L1O75674 476 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 UPP2O95045 317 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ARL4CP56559 192 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SYT2Q8N9I0 419 aaPredicted RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ACTRT1Q8TDG2 376 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 ZC3H15Q8WU90 426 aaKnown RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SCFD1Q8WVM8 642 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 TRIM55Q9BYV6 548 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 SLC38A10Q9HBR0 1119 aa13.05□□□□□ -0.32
COLCA1-201ENST00000355430 REXO2Q9Y3B8 237 aaKnown RBP13.05□□□□□ -0.32
COLCA1-201ENST00000355430 KPNA6O60684 536 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 CPB1P15086 417 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 PDIA2Q13087 525 aaKnown RBP13.04□□□□□ -0.32
COLCA1-201ENST00000355430 TTMPQ5BVD1 217 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 RNF219Q5W0B1 726 aaPredicted RBP13.04□□□□□ -0.32
COLCA1-201ENST00000355430 TRMT10CQ7L0Y3 403 aaKnown RBP13.04□□□□□ -0.32
COLCA1-201ENST00000355430 LRRC34Q8IZ02 419 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 ADAM33Q9BZ11 813 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 SLIT3O75094 1523 aa13.04□□□□□ -0.32
COLCA1-201ENST00000355430 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms