RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 GID8Q9NWU2 228 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 IMPAD1Q9NX62 359 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 DEFA1P59665 94 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 DEFA3P59666 94 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 TWF1Q12792 350 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 NLRP10Q86W26 655 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 IFNAR1P17181 557 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SFNP31947 248 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RABGAP1LQ5R372 815 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM187AA6NFU0 413 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 P3H2Q8IVL5 708 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 MTERF3Q96E29 417 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 OSBPL9Q96SU4 736 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 HDAC6Q9UBN7 1215 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ASXL2Q76L83 1435 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 DRAP1Q14919 205 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ALFQ53S48 1182 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CCDC157Q569K6 752 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 C1orf54Q8WWF1 131 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 GTF2A1LQ9UNN4 478 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PIN4Q9Y237 131 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 KIAA0232Q92628 1395 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SULT1E1P49888 294 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 CSTF3Q12996 717 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 RESP18Q5W5W9 173 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 IL17REQ8NFR9 667 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PABPC5Q96DU9 382 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 EIF4E1BA6NMX2 242 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 F8W810 466 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PCSK7Q16549 785 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ZNF746Q6NUN9 644 aaPredicted RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 WWP1Q9H0M0 922 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SOX11P35716 441 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 SERPINB4P48594 390 aa6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 ALG13Q9NP73 1137 aaKnown RBP6.08□□□□□ -1.44
SRGAP1-201ENST00000355086 PTPRN2Q92932 1015 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 MASTLQ96GX5 879 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 EIF2S1P05198 315 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 FYNP06241 537 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 DARSP14868 501 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 IZUMO3Q5VZ72 239 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 STKLD1Q8NE28 680 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 PPP1R2P1Q96PQ5 205 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 COASYQ13057 564 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 C16orf89Q6UX73 402 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 PLEKHA8P1O95397 391 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 IFNEQ86WN2 208 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 NSUN6Q8TEA1 469 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 MED15Q96RN5 788 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 TLR7Q9NYK1 1049 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 GRID2IPA4D2P6 1211 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 EVPLLA8MZ36 301 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 PSMC5P62195 406 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 USP10Q14694 798 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CD274Q9NZQ7 290 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CLASP2O75122 1294 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 MYL2P10916 166 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CRKP46108 304 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 LRRC36Q1X8D7 754 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 STN1Q9H668 368 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZFYVE1Q9HBF4 777 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CYP2D7A0A087X1C5 515 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 C4BPBP20851 252 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 MTFR1Q15390 333 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 AASDHQ4L235 1098 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZNF438Q7Z4V0 828 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZNF512Q96ME7 567 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 RCOR1Q9UKL0 485 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 PNMA6AP0CW24 399 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 C1orf131Q8NDD1 294 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 USP17L5A8MUK1 530 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 HSPA9P38646 679 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ST13P50502 369 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ATXN3P54252 364 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 NLRP14Q86W24 1093 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 EME1Q96AY2 570 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 LXNQ9BS40 222 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 RNF146Q9NTX7 359 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 RNF103O00237 685 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 COPB2P35606 906 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 SLC25A13Q9UJS0 675 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CFAP99D6REC4 459 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 DYRK3O43781 588 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 IRF1P10914 325 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 UGP2Q16851 508 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 GSPT2Q8IYD1 628 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CCDC103Q8IW40 242 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 KIRREL3Q8IZU9 778 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ST13P5Q8NFI4 369 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 DTX3LQ8TDB6 740 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZC3H7BQ9UGR2 993 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 POTEMA6NI47 508 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZBTB5O15062 677 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 SEPT5Q99719 369 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 C21orf2O43822 256 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 CNBD2Q96M20 576 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms