RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ZC3H4Q9UPT8 1303 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 SPDYE16A6NNV3 312 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 TMEM110-MUSTN1A8MSY1 372 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 MYO1FO00160 1098 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 NKRFO15226 690 aaKnown RBP eCLIP3.98□□□□□ -1.77
RNF38-203ENST00000353739 CYP26A1O43174 497 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ZMYND10O75800 440 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 CYP1A1P04798 512 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 CLTAP09496 248 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 TAL1P17542 331 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 ATICP31939 592 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 COILP38432 576 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 MDH1P40925 334 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 HMGCS2P54868 508 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ERVK-9P63128 1117 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 FMO1Q01740 532 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 POU5F1BQ06416 359 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 TRPC3Q13507 836 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 PTK6Q13882 451 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 BYSLQ13895 437 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 MESDQ14696 234 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 TMEM132BQ14DG7 1078 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 SGSM1Q2NKQ1 1148 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ZNF484Q5JVG2 852 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ANGEL2Q5VTE6 544 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 CDCA2Q69YH5 1023 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 METTL7BQ6UX53 244 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 C15orf39Q6ZRI6 1047 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 YTHDF3Q7Z739 585 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 NOP9Q86U38 636 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 BRSK2Q8IWQ3 736 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 CCDC105Q8IYK2 499 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 KATNAL2Q8IYT4 538 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 SEPT1Q8WYJ6 367 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 MAGOHBQ96A72 148 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 FAM213AQ9BRX8 229 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 AP1M1Q9BXS5 423 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 NFKBIZQ9BYH8 718 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 RASSF4Q9H2L5 321 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ACTR5Q9H9F9 607 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 GPRC5DQ9NZD1 345 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 ZNF214Q9UL59 606 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 PACSIN2Q9UNF0 486 aaPredicted RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 BCS1LQ9Y276 419 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 SLC45A1Q9Y2W3 748 aa3.98□□□□□ -1.77
RNF38-203ENST00000353739 RRP15Q9Y3B9 282 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 DICER1Q9UPY3 1922 aaKnown RBP3.98□□□□□ -1.77
RNF38-203ENST00000353739 ANKRD63C9JTQ0 380 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 NFKBIEO00221 500 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 IRF6O14896 467 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 SORBS3O60504 671 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 LGR5O75473 907 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 HLA-DRAP01903 254 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 PAEPP09466 180 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 MYBL2P10244 700 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 ATF2P15336 505 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 COMTP21964 271 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 DLG4P78352 724 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 CCNA1P78396 465 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 DHX9Q08211 1270 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 PPIL2Q13356 520 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 PCBP1Q15365 356 aaKnown RBP eCLIP3.97□□□□□ -1.77
RNF38-203ENST00000353739 STILQ15468 1287 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 CCDC137Q6PK04 289 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 CBWD2Q8IUF1 395 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 KSR1Q8IVT5 923 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 MCOLN2Q8IZK6 566 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 ANKS4BQ8N8V4 417 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 TTC13Q8NBP0 860 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 CD101Q93033 1021 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 ARHGEF26Q96DR7 871 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 PGM2Q96G03 612 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 DHX33Q9H6R0 707 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 SUGCTQ9HAC7 445 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 A1CFQ9NQ94 594 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 CNTN6Q9UQ52 1028 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 TRPC6Q9Y210 931 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 ZSWIM8A7E2V4 1837 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 A0A087WUV0 522 aaPredicted RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 LRRIQ4A6NIV6 560 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 NOP56O00567 594 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 PROSCO94903 275 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 STBD1O95210 358 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 C4BPAP04003 597 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 MMEP08473 750 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 SLURP2P0DP57 97 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 DLATP10515 647 aaKnown RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 CHRNB2P17787 502 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 EDNRBP24530 442 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 GNA15P30679 374 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 GSCP56915 257 aaPredicted RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 PIGHQ14442 188 aaPredicted RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 KCTD2Q14681 263 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 ZACNQ401N2 412 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 SGO2Q562F6 1265 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 TTMPQ5BVD1 217 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 C1orf220Q5T0J3 134 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 NBPF12Q5TAG4 269 aaPredicted RBP3.97□□□□□ -1.77
RNF38-203ENST00000353739 SRLQ86TD4 932 aa3.97□□□□□ -1.77
RNF38-203ENST00000353739 SULF1Q8IWU6 871 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms