RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 NEK8Q86SG6 692 aa17.41■□□□□ 0.38
COPE-202ENST00000349893 MAP4K3Q8IVH8 894 aa17.41■□□□□ 0.38
COPE-202ENST00000349893 DDX1Q92499 740 aaKnown RBP17.41■□□□□ 0.38
COPE-202ENST00000349893 ANKEF1Q9NU02 776 aa17.41■□□□□ 0.38
COPE-202ENST00000349893 PAPSS2O95340 614 aaPredicted RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 CEBPBP17676 345 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 PMLP29590 882 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 CNR2P34972 360 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 MLLT6P55198 1093 aaPredicted RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 CCT2P78371 535 aaKnown RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 CYP4A11Q02928 519 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 LPAL2Q16609 132 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 FAM187BQ17R55 369 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 CHAMP1Q96JM3 812 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 HSD17B14Q9BPX1 270 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 NDRG2Q9UN36 371 aaKnown RBP17.4■□□□□ 0.38
COPE-202ENST00000349893 SNX14Q9Y5W7 946 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 CDY1Q9Y6F8 540 aa17.4■□□□□ 0.38
COPE-202ENST00000349893 RALGAPA1Q6GYQ0 2036 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 PTPN2P17706 415 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 HSPA4P34932 840 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 LIMK1P53667 647 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 FAM78AQ5JUQ0 283 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 CDCA2Q69YH5 1023 aaPredicted RBP17.39■□□□□ 0.37
COPE-202ENST00000349893 FAM3CQ92520 227 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 IRF7Q92985 503 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 ASB16Q96NS5 453 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.37
COPE-202ENST00000349893 CXCL16Q9H2A7 254 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 FZD8Q9H461 694 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 BRD9Q9H8M2 597 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.37
COPE-202ENST00000349893 PRMT7Q9NVM4 692 aaPredicted RBP17.39■□□□□ 0.37
COPE-202ENST00000349893 DAXXQ9UER7 740 aaPredicted RBP17.39■□□□□ 0.37
COPE-202ENST00000349893 ANGPTL2Q9UKU9 493 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
COPE-202ENST00000349893 HRO43593 1189 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 RECQL4O94761 1208 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 ABLIM3O94929 683 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 CHRNB1P11230 501 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 CXCL12P48061 93 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 RARRES1P49788 294 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 SATB1Q01826 763 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 SIM2Q14190 667 aaPredicted RBP17.38■□□□□ 0.37
COPE-202ENST00000349893 GAS6Q14393 721 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 NCAPH2Q6IBW4 605 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 SLC8B1Q6J4K2 584 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 CD300LGQ6UXG3 332 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 PRR23BQ6ZRT6 265 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 TPH2Q8IWU9 490 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 ZNF461Q8TAF7 563 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 AIFM3Q96NN9 605 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 NAP1L4Q99733 375 aaKnown RBP17.38■□□□□ 0.37
COPE-202ENST00000349893 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 LMAN1LQ9HAT1 526 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 SNTG2Q9NY99 539 aa17.38■□□□□ 0.37
COPE-202ENST00000349893 ARNTLO00327 626 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 NRG2O14511 850 aaPredicted RBP17.37■□□□□ 0.37
COPE-202ENST00000349893 TM4SF5O14894 197 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 N4BP3O15049 544 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 GDF9O60383 454 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 IGFBP6P24592 240 aaPredicted RBP17.37■□□□□ 0.37
COPE-202ENST00000349893 GRM2Q14416 872 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 SLFN12Q8IYM2 578 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 SPEM1Q8N4L4 309 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 DDX27Q96GQ7 796 aaKnown RBP17.37■□□□□ 0.37
COPE-202ENST00000349893 EIF2AK1Q9BQI3 630 aaKnown RBP17.37■□□□□ 0.37
COPE-202ENST00000349893 POLR3FQ9H1D9 316 aaPredicted RBP17.37■□□□□ 0.37
COPE-202ENST00000349893 TRPV4Q9HBA0 871 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 PIAS3Q9Y6X2 628 aa17.37■□□□□ 0.37
COPE-202ENST00000349893 CCDC194A0A1B0GVG4 234 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 WDR27A2RRH5 827 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 TTLL13PA6NNM8 815 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 K7ESF4 209 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 CCNT1O60563 726 aaKnown RBP17.36■□□□□ 0.37
COPE-202ENST00000349893 PSMC3P17980 439 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 TKTP29401 623 aaKnown RBP17.36■□□□□ 0.37
COPE-202ENST00000349893 HOXA6P31267 233 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 PTGDRQ13258 359 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 VITQ6UXI7 678 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 LONP2Q86WA8 852 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 TCEAL8Q8IYN2 117 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 DEPDC1BQ8WUY9 529 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 TCEAL4Q96EI5 215 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 MSANTD3Q96H12 275 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 PPP1R10Q96QC0 940 aaKnown RBP17.36■□□□□ 0.37
COPE-202ENST00000349893 GREB1Q4ZG55 1949 aa17.36■□□□□ 0.37
COPE-202ENST00000349893 ZNF197O14709 1029 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 B3GAT3O94766 335 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 LRG1P02750 347 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
COPE-202ENST00000349893 ATF2P15336 505 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 CCR2P41597 374 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 ROR1Q01973 937 aa17.35■□□□□ 0.37
COPE-202ENST00000349893 DMWDQ09019 674 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms