RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SCNN1GP51170 649 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 EHHADHQ08426 723 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 MGAT3Q09327 533 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TAF12Q16514 161 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 PPM1KQ8N3J5 372 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 WNT8BQ93098 351 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 EIF2AQ9BY44 585 aaKnown RBP8.79□□□□□ -1
HMGCR-202ENST00000343975 CCDC113Q9H0I3 377 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 DEF6Q9H4E7 631 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TMEM8AQ9HCN3 771 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 DPP3Q9NY33 737 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 IFNKQ9P0W0 207 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 CEP83Q9Y592 693 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 SCN10AQ9Y5Y9 1956 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TGFB1I1O43294 461 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 NBNO60934 754 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TRIM49P0CI25 452 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TRIM49CP0CI26 452 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 CD44P16070 742 aaKnown RBP8.79□□□□□ -1
HMGCR-202ENST00000343975 KCNH2Q12809 1159 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 RAPGEF1Q13905 1077 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 VWA3BQ502W6 1294 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 APPL2Q8NEU8 664 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 LPPQ93052 612 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 KCTD10Q9H3F6 313 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 STK39Q9UEW8 545 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 ITGA11Q9UKX5 1188 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 LRRC37A2A6NM11 1700 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TRIM43BA6NCK2 446 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 LACTBL1A8MY62 500 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 KRT5P13647 590 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TUSC3Q13454 348 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 NCOA4Q13772 614 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TRIM14Q14142 442 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 SGSM1Q2NKQ1 1148 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 PHOSPHO2Q8TCD6 241 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TRIM43Q96BQ3 446 aaPredicted RBP8.79□□□□□ -1
HMGCR-202ENST00000343975 GRPEL1Q9HAV7 217 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 SEPT11Q9NVA2 429 aaKnown RBP8.79□□□□□ -1
HMGCR-202ENST00000343975 INTS13Q9NVM9 706 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 GCNT4Q9P109 453 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 LCTP09848 1927 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 ZMYM2Q9UBW7 1377 aa8.79□□□□□ -1
HMGCR-202ENST00000343975 TISP43B9A030 160 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 TBXAS1P24557 533 aaPredicted RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 RPL9P32969 192 aaKnown RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 MFAP3P55082 362 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 HIC1Q14526 733 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CEP120Q8N960 986 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 FGFBP2Q9BYJ0 223 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 SSX2IPQ9Y2D8 614 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 DOCK5Q9H7D0 1870 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 MYH15Q9Y2K3 1946 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 AKAP3O75969 853 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CXCL10P02778 98 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CD19P15391 556 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 MAGEA10P43363 369 aaPredicted RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 CASP4P49662 377 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 TSPY1Q01534 308 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 LRMPQ12912 555 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 TDRD12Q587J7 1177 aaKnown RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 MSANTD4Q8NCY6 345 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 TAF4BQ92750 862 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CRACR2AQ9BSW2 395 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 WNT8AQ9H1J5 351 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CPSF3Q9UKF6 684 aaKnown RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 C9IYK1 514 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 ITGB3P05106 788 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 DESP17661 470 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 ELF1P32519 619 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CTNNB1P35222 781 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 KRT31Q15323 416 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CEP57Q86XR8 500 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 PARD3BQ8TEW8 1205 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 RAD9AQ99638 391 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 LSM14BQ9BX40 385 aaKnown RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 MTMR12Q9C0I1 747 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 NUCKS1Q9H1E3 243 aaKnown RBP8.78□□□□□ -1
HMGCR-202ENST00000343975 EVPLQ92817 2033 aa8.78□□□□□ -1
HMGCR-202ENST00000343975 CASTOR2A6NHX0 329 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 URODP06132 367 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 ODC1P11926 461 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 POLR2BP30876 1174 aaKnown RBP8.77□□□□□ -1
HMGCR-202ENST00000343975 ATICP31939 592 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 FMO5P49326 533 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 ENOSF1Q7L5Y1 443 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 DPH6Q7L8W6 267 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 TRAPPC11Q7Z392 1133 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 TXLNBQ8N3L3 684 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 HPDLQ96IR7 371 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.77□□□□□ -15e-7■■□□□ 12.3
HMGCR-202ENST00000343975 DSEQ9UL01 958 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 ATP8B3O60423 1300 aa8.77□□□□□ -1
HMGCR-202ENST00000343975 MNX1P50219 401 aaPredicted RBP8.77□□□□□ -1.01
HMGCR-202ENST00000343975 SNX16P57768 344 aa8.77□□□□□ -1.01
HMGCR-202ENST00000343975 BPIFB4P59827 614 aa8.77□□□□□ -1.01
HMGCR-202ENST00000343975 ENPEPQ07075 957 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms