RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TBK1Q9UHD2 729 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 PTPN22Q9Y2R2 807 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 WASF2Q9Y6W5 498 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 ARHGAP4P98171 946 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 SCUBE1Q8IWY4 988 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 CCDC110Q8TBZ0 833 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 ABTB1Q969K4 478 aaPredicted RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 NMD3Q96D46 503 aaKnown RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 MTMR9Q96QG7 549 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 FOXP3Q9BZS1 431 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 UNC45AQ9H3U1 944 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 C6orf50Q9HD87 102 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 PRDM11Q9NQV5 511 aa19.66■□□□□ 0.74
SMPD1-201ENST00000342245 MTO1Q9Y2Z2 717 aaKnown RBP19.66■□□□□ 0.74
SMPD1-201ENST00000342245 SORBS3O60504 671 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 SUPT3HO75486 399 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 SOX5P35711 763 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 MLH1P40692 756 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 TXKP42681 527 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 GRM4Q14833 912 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 TMCO4Q5TGY1 634 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 AAGABQ6PD74 315 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 GRK7Q8WTQ7 553 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 ARL8BQ9NVJ2 186 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 TMED5Q9Y3A6 229 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 LRP5O75197 1615 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 UBR2Q8IWV8 1755 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 RGL2O15211 777 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 ACADVLP49748 655 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 PPP2R5CQ13362 524 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 CALCRLQ16602 461 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 TMEM63BQ5T3F8 832 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 SYDE2Q5VT97 1194 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 CROCCP3Q8IVE0 287 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 PLVAPQ9BX97 442 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 SSU72Q9NP77 194 aaKnown RBP19.65■□□□□ 0.74
SMPD1-201ENST00000342245 SIX2Q9NPC8 291 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 TAS2R1Q9NYW7 299 aa19.65■□□□□ 0.74
SMPD1-201ENST00000342245 DCCP43146 1447 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 CFAP69A5D8W1 941 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 RARBP10826 455 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 CYP11B2P19099 503 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 NR2F2P24468 414 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 SMARCA1P28370 1054 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 TMED2Q15363 201 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 PDSS2Q86YH6 399 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 SNX29Q8TEQ0 813 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 ZNF75CPQ92670 426 aaPredicted RBP19.64■□□□□ 0.74
SMPD1-201ENST00000342245 KANSL2Q9H9L4 492 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 THEGQ9P2T0 379 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 ASIC3Q9UHC3 531 aa19.64■□□□□ 0.74
SMPD1-201ENST00000342245 ROBO3Q96MS0 1386 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 UQCRBP14927 111 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 ABCB4P21439 1286 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 CHKAP35790 457 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 RPL5P46777 297 aaKnown RBP19.64■□□□□ 0.73
SMPD1-201ENST00000342245 RAB15P59190 212 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 KRT17Q04695 432 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 PTK6Q13882 451 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 CC2D2BQ6DHV5 1058 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 TMPRSS6Q8IU80 811 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 GLYCTKQ8IVS8 523 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 SLF2Q8IX21 1173 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.64■□□□□ 0.73
SMPD1-201ENST00000342245 OR6Y1Q8NGX8 325 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 TRIM55Q9BYV6 548 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 TRABDQ9H4I3 376 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 NPHS2Q9NP85 383 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 ZNF330Q9Y3S2 320 aaPredicted RBP19.64■□□□□ 0.73
SMPD1-201ENST00000342245 PCDHA2Q9Y5H9 948 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 IGSF9BQ9UPX0 1349 aa19.64■□□□□ 0.73
SMPD1-201ENST00000342245 ARHGAP10A1A4S6 786 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 TP73O15350 636 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 CETPP11597 493 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 VARSP26640 1264 aaKnown RBP19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SPIDRQ14159 915 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 C1orf228Q6PIY5 440 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 KIF6Q6ZMV9 814 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 ARMCX6Q7L4S7 300 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 DGKHQ86XP1 1220 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SPOCK2Q92563 424 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 STK33Q9BYT3 514 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 CLIC5Q9NZA1 410 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 TRAF3IP3Q9Y228 551 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 FOXO6A8MYZ6 492 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SLC16A3O15427 465 aaKnown RBP19.63■□□□□ 0.73
SMPD1-201ENST00000342245 TNFAIP3P21580 790 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 RNF207Q6ZRF8 634 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 RINLQ6ZS11 566 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SATL1Q86VE3 508 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 RASSF3Q86WH2 238 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 LRRC6Q86X45 466 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 ZDHHC14Q8IZN3 488 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 NUP93Q8N1F7 819 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SCFD1Q8WVM8 642 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 CFAP57Q96MR6 1250 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 RIOK1Q9BRS2 568 aaKnown RBP19.63■□□□□ 0.73
SMPD1-201ENST00000342245 ANAPC5Q9UJX4 755 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 TMEM98Q9Y2Y6 226 aa19.63■□□□□ 0.73
SMPD1-201ENST00000342245 SLC26A4O43511 780 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms