RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 DCAF4L1Q3SXM0 396 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 AXDND1Q5T1B0 1012 aaPredicted RBP17.22■□□□□ 0.35
LINC01116-202ENST00000339037 C1orf210Q8IVY1 113 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 FOXQ1Q9C009 403 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 GDAQ9Y2T3 454 aa17.22■□□□□ 0.35
LINC01116-202ENST00000339037 B3GAT3O94766 335 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 OR52Z1P0C646 297 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 OR1D2P34982 312 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 NEK4P51957 841 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 EFNA5P52803 228 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 STARD6P59095 220 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 RAB33AQ14088 237 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 EEF1DP3Q658K8 133 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 KIFC3Q9BVG8 833 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 MTRRQ9UBK8 725 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 NCOR2Q9Y618 2525 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 DOCK6Q96HP0 2047 aa17.21■□□□□ 0.35
LINC01116-202ENST00000339037 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 EDN1P05305 212 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 POU2F2P09086 479 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 SP9P0CG40 484 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 GLULP15104 373 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 FGFR3P22607 806 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
LINC01116-202ENST00000339037 GUCY1B3Q02153 619 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 ORC2Q13416 577 aaPredicted RBP17.2■□□□□ 0.34
LINC01116-202ENST00000339037 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
LINC01116-202ENST00000339037 UVSSAQ2YD98 709 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 GLRA4Q5JXX5 417 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 HAUS3Q68CZ6 603 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 ITFG1Q8TB96 612 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 IFT74Q96LB3 600 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
LINC01116-202ENST00000339037 CACNA1IQ9P0X4 2223 aa17.2■□□□□ 0.34
LINC01116-202ENST00000339037 TRAPPC3O43617 180 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 CLCNKBP51801 687 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 PFKPQ01813 784 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 MLF2Q15773 248 aaPredicted RBP17.19■□□□□ 0.34
LINC01116-202ENST00000339037 PABPC1LQ4VXU2 614 aaKnown RBP17.19■□□□□ 0.34
LINC01116-202ENST00000339037 ATF7IP2Q5U623 682 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 RTL10Q7L3V2 364 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 APBB1IPQ7Z5R6 666 aaPredicted RBP17.19■□□□□ 0.34
LINC01116-202ENST00000339037 NPAS3Q8IXF0 933 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 PPP1R10Q96QC0 940 aaKnown RBP17.19■□□□□ 0.34
LINC01116-202ENST00000339037 HINFPQ9BQA5 517 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 HCFC1R1Q9NWW0 138 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 CDY1Q9Y6F8 540 aa17.19■□□□□ 0.34
LINC01116-202ENST00000339037 KANSL1LA0AUZ9 987 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 LRRN2O75325 713 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 MUTP22033 750 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 PRKCQQ04759 706 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 ZNF174Q15697 407 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 UPP1Q16831 310 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 RSPO2Q6UXX9 243 aaPredicted RBP17.18■□□□□ 0.34
LINC01116-202ENST00000339037 ANKS3Q6ZW76 656 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 C8orf76Q96K31 380 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 UROC1Q96N76 676 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 KXD1Q9BQD3 176 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 DDX23Q9BUQ8 820 aaKnown RBP17.18■□□□□ 0.34
LINC01116-202ENST00000339037 BCO2Q9BYV7 579 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 BHMT2Q9H2M3 363 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 BACE2Q9Y5Z0 518 aa17.18■□□□□ 0.34
LINC01116-202ENST00000339037 VWA8A3KMH1 1905 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 IGFBP6P24592 240 aaPredicted RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 TKTP29401 623 aaKnown RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 CCT6AP40227 531 aaKnown RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 UBXN2BQ14CS0 331 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 SLC44A4Q53GD3 710 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 NT5DC1Q5TFE4 455 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 KIAA2013Q8IYS2 634 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 ING5Q8WYH8 240 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 DDX27Q96GQ7 796 aaKnown RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 FOXP1Q9H334 677 aaPredicted RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 GOLGA2P5Q9HBQ8 144 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 POLD4Q9HCU8 107 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 TOPORSQ9NS56 1045 aaPredicted RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 DNMT3BQ9UBC3 853 aaKnown RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 MRPS23Q9Y3D9 190 aaKnown RBP17.17■□□□□ 0.34
LINC01116-202ENST00000339037 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
LINC01116-202ENST00000339037 I3L4J1 428 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 K7ERI5 159 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
LINC01116-202ENST00000339037 TTC38Q5R3I4 469 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 MAML2Q8IZL2 1156 aaPredicted RBP17.16■□□□□ 0.34
LINC01116-202ENST00000339037 PDCD7Q8N8D1 485 aaKnown RBP17.16■□□□□ 0.34
LINC01116-202ENST00000339037 C3orf58Q8NDZ4 430 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 RUBCNQ92622 972 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 RMDN1Q96DB5 314 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 SPATA6Q9NWH7 488 aaPredicted RBP17.16■□□□□ 0.34
LINC01116-202ENST00000339037 GDE1Q9NZC3 331 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 TNFSF13BQ9Y275 285 aa17.16■□□□□ 0.34
LINC01116-202ENST00000339037 SMIM28A0A1B0GU29 152 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 LAMTOR5O43504 91 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 EIF5BO60841 1220 aaKnown RBP17.15■□□□□ 0.34
LINC01116-202ENST00000339037 KINO60870 393 aaKnown RBP17.15■□□□□ 0.34
LINC01116-202ENST00000339037 GABBR2O75899 941 aa17.15■□□□□ 0.34
LINC01116-202ENST00000339037 CENPBP07199 599 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms