RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 FAM153CQ494X1 144 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 TAX1BP1Q86VP1 789 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.67□□□□□ -0.86
COPB2-201ENST00000333188 UBA3Q8TBC4 463 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 EPS8L1Q8TE68 723 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 BORCS6Q96GS4 357 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 EDEM3Q9BZQ6 932 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 SMARCAD1Q9H4L7 1026 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 GINM1Q9NU53 330 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 MAP3K20Q9NYL2 800 aaKnown RBP9.67□□□□□ -0.86
COPB2-201ENST00000333188 ERAP1Q9NZ08 941 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 FAM153AQ9UHL3 310 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 SIPA1L1O43166 1804 aa9.67□□□□□ -0.86
COPB2-201ENST00000333188 TNPO2O14787 897 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 KRT14P02533 472 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 TNNC2P02585 160 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 LGALS2P05162 132 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 PDGFRBP09619 1106 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 GGCXP38435 758 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 SLCO1A2P46721 670 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 MARSP56192 900 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 ALCAMQ13740 583 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 BRD3Q15059 726 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 PAN2Q504Q3 1202 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 SCYL2Q6P3W7 929 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 ILDR2Q71H61 639 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 GPR142Q7Z601 462 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 SH2D3CQ8N5H7 860 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 RBBP8NLQ8NC74 664 aaPredicted RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 RFFLQ8WZ73 363 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 RNPC3Q96LT9 517 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 HEXIM2Q96MH2 286 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 FUT8Q9BYC5 575 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 ZWILCHQ9H900 591 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 FAM49BQ9NUQ9 324 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 STIM2Q9P246 746 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 DLEC1Q9Y238 1755 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 ANO9A1A5B4 782 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 PGRMC1O00264 195 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 ADCY3O60266 1144 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 PGK1P00558 417 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 GPC3P51654 580 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 YARSP54577 528 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 MAPK8IP2Q13387 824 aaPredicted RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 SMAD1Q15797 465 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 ATP13A4Q4VNC1 1196 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 KCNT1Q5JUK3 1230 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 BEND6Q5SZJ8 279 aaPredicted RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 XRRA1Q6P2D8 792 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 C1orf131Q8NDD1 294 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 ATP8B4Q8TF62 1192 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 LRRN4Q8WUT4 740 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 AGAP1Q9UPQ3 857 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 ATP8A1Q9Y2Q0 1164 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 F5H423 210 aaPredicted RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 CNMDO75829 334 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 CAPN2P17655 700 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 NAMPTP43490 491 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 CDK17Q00537 523 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 SEL1L2Q5TEA6 688 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 RNF10Q8N5U6 811 aaKnown RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 EMC1Q8N766 993 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 C10orf88Q9H8K7 445 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 ASIC3Q9UHC3 531 aa9.66□□□□□ -0.86
COPB2-201ENST00000333188 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
COPB2-201ENST00000333188 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ANKRD62A6NC57 917 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ASB14A6NK59 587 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 FECHP22830 423 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 TNFAIP2Q03169 654 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 DUOXA2Q1HG44 320 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 CFAP58Q5T655 872 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 UBL4BQ8N7F7 174 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 DNAJB3Q8WWF6 145 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ALG3Q92685 438 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ACBD3Q9H3P7 528 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 DHX33Q9H6R0 707 aaKnown RBP9.65□□□□□ -0.86
COPB2-201ENST00000333188 APOBEC3GQ9HC16 384 aaKnown RBP9.65□□□□□ -0.86
COPB2-201ENST00000333188 TTC7AQ9ULT0 858 aaPredicted RBP9.65□□□□□ -0.86
COPB2-201ENST00000333188 ADAMTS5Q9UNA0 930 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 TCRBV7S2A1N4TA0A589 114 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 DCAF8L1A6NGE4 600 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 O00370 1275 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 GH1P01241 217 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 NFICP08651 508 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 SLFN12LQ6IEE8 588 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 IFT20Q8IY31 132 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 C18orf8Q96DM3 657 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 KIF12Q96FN5 646 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 PTPN18Q99952 460 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 ARHGAP28Q9P2N2 729 aa9.65□□□□□ -0.86
COPB2-201ENST00000333188 PIN4Q9Y237 131 aaKnown RBP9.65□□□□□ -0.86
COPB2-201ENST00000333188 TNS1Q9HBL0 1735 aaKnown RBP9.65□□□□□ -0.87
COPB2-201ENST00000333188 SSC5DA1L4H1 1573 aa9.65□□□□□ -0.87
COPB2-201ENST00000333188 HSF2BPO75031 334 aa9.64□□□□□ -0.87
COPB2-201ENST00000333188 TOM1L1O75674 476 aa9.64□□□□□ -0.87
COPB2-201ENST00000333188 POLR2BP30876 1174 aaKnown RBP9.64□□□□□ -0.87
COPB2-201ENST00000333188 HOXA7P31268 230 aaPredicted RBP9.64□□□□□ -0.87
COPB2-201ENST00000333188 GTF2A2P52657 109 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms