RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 LBRQ14739 615 aaKnown RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 MEI1Q5TIA1 1274 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 ATG4CQ96DT6 458 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 MTBPQ96DY7 904 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 APEX2Q9UBZ4 518 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 GPS1Q13098 491 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 SNRNP35Q16560 246 aaKnown RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 THEMIS2Q5TEJ8 643 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 PGBD3Q8N328 593 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 ATPAF2Q8N5M1 289 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 IGDCC4Q8TDY8 1250 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 NT5C1AQ9BXI3 368 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 CATSPERBQ9H7T0 1116 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 C3orf70A6NLC5 250 aaPredicted RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 KIF1CO43896 1103 aaKnown RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 KDM1AO60341 852 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 OR1G1P47890 313 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 LRRC23Q53EV4 343 aaPredicted RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 REEP2Q9BRK0 252 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 TRIM9Q9C026 710 aa18.79■□□□□ 0.6
PXN-203ENST00000323871 G3BP2Q9UN86 482 aaKnown RBP18.79■□□□□ 0.6
PXN-203ENST00000323871 P4HA2O15460 535 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 MTHFD1LQ6UB35 978 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 MMS22LQ6ZRQ5 1243 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 CD302Q8IX05 232 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 JMJD4Q9H9V9 463 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 DCCP43146 1447 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 CFLARO15519 480 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 LRG1P02750 347 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 ESRRGP62508 458 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 DHX34Q14147 1143 aaKnown RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 E2F5Q15329 346 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 KIRREL3Q8IZU9 778 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 PARD6BQ9BYG5 372 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 EML4Q9HC35 981 aaKnown RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 NRXN1Q9ULB1 1477 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 RASA4BC9J798 803 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 RASA4O43374 803 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 SLC7A5Q01650 507 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 CACNB2Q08289 660 aaPredicted RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 SMIM5Q71RC9 77 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 DNAJC17Q9NVM6 304 aaKnown RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 SPECC1L-ADORA2AF8WAN1 911 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 CYP26A1O43174 497 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 ASMTLO95671 621 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 IFT88Q13099 833 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 TEDDM1Q5T9Z0 273 aa18.78■□□□□ 0.6
PXN-203ENST00000323871 GBA2Q9HCG7 927 aaPredicted RBP18.78■□□□□ 0.6
PXN-203ENST00000323871 ODC1P11926 461 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 CAP2P40123 477 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 MAGEA9P43362 315 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 ARL4DP49703 201 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 P3H1Q32P28 736 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 EDRF1Q3B7T1 1238 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 KLHL29Q96CT2 875 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 SENP7Q9BQF6 1050 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 PLAAQ9Y263 795 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 MAP4P27816 1152 aaKnown RBP18.77■□□□□ 0.6
PXN-203ENST00000323871 PIGHQ14442 188 aaPredicted RBP18.77■□□□□ 0.6
PXN-203ENST00000323871 SCFD1Q8WVM8 642 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 KDM4CQ9H3R0 1056 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 POLRMTO00411 1230 aaKnown RBP18.77■□□□□ 0.6
PXN-203ENST00000323871 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.61e-7■■□□□ 12.2
PXN-203ENST00000323871 WASHC5Q12768 1159 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 ARHGEF7Q14155 803 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 RBBP7Q16576 425 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 MGAT5BQ3V5L5 792 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 ANKRD40Q6AI12 368 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 SHC4Q6S5L8 630 aa18.77■□□□□ 0.6
PXN-203ENST00000323871 ACTR5Q9H9F9 607 aaPredicted RBP18.77■□□□□ 0.6
PXN-203ENST00000323871 PI4K2BG5E9Z4 385 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 ACOT2P49753 483 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 PMS2P54278 862 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 POU5F1BQ06416 359 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 SYT2Q8N9I0 419 aaPredicted RBP18.77■□□□□ 0.59
PXN-203ENST00000323871 SLITRK1Q96PX8 696 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 POLR3CQ9BUI4 534 aaPredicted RBP18.77■□□□□ 0.59
PXN-203ENST00000323871 VPS33BQ9H267 617 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 DOLKQ9UPQ8 538 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 ZNF609O15014 1411 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 ALDH7A1P49419 539 aaKnown RBP18.77■□□□□ 0.59
PXN-203ENST00000323871 TAF6P49848 677 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 EPM2AIP1Q7L775 607 aaPredicted RBP18.77■□□□□ 0.59
PXN-203ENST00000323871 GLYCTKQ8IVS8 523 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 TRIM59Q8IWR1 403 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 PPM1NQ8N819 430 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 MUC3BQ9H195 1237 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 TMEM60Q9H2L4 133 aa18.77■□□□□ 0.59
PXN-203ENST00000323871 UBQLN1Q9UMX0 589 aaKnown RBP18.77■□□□□ 0.59
PXN-203ENST00000323871 PPRC1Q5VV67 1664 aaKnown RBP18.76■□□□□ 0.59
PXN-203ENST00000323871 PYGLP06737 847 aa18.76■□□□□ 0.59
PXN-203ENST00000323871 HARS2P49590 506 aaKnown RBP18.76■□□□□ 0.59
PXN-203ENST00000323871 EIF3EP60228 445 aaKnown RBP18.76■□□□□ 0.59
PXN-203ENST00000323871 EFHC1Q5JVL4 640 aa18.76■□□□□ 0.59
PXN-203ENST00000323871 RBBP8NLQ8NC74 664 aaPredicted RBP18.76■□□□□ 0.59
PXN-203ENST00000323871 CAPN11Q9UMQ6 739 aa18.76■□□□□ 0.59
PXN-203ENST00000323871 NPHP3-ACAD11A0A0J9YXS1 232 aa18.76■□□□□ 0.59
PXN-203ENST00000323871 CFAP69A5D8W1 941 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms