RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 DHX34Q14147 1143 aaKnown RBP12.88□□□□□ -0.35
NCL-201ENST00000322723 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
NCL-201ENST00000322723 RDH13Q8NBN7 331 aa12.88□□□□□ -0.35
NCL-201ENST00000322723 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
NCL-201ENST00000322723 RNPC3Q96LT9 517 aaKnown RBP12.88□□□□□ -0.35
NCL-201ENST00000322723 TOPORSQ9NS56 1045 aaPredicted RBP12.88□□□□□ -0.35
NCL-201ENST00000322723 FBXO40Q9UH90 709 aa12.88□□□□□ -0.35
NCL-201ENST00000322723 CEP104O60308 925 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 PROZP22891 400 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 STXBP2Q15833 593 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 KDM7AQ6ZMT4 941 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.87□□□□□ -0.35
NCL-201ENST00000322723 FZD1Q9UP38 647 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 OPA1O60313 960 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 TGFB3P10600 412 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 UBA1P22314 1058 aaKnown RBP12.87□□□□□ -0.35
NCL-201ENST00000322723 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
NCL-201ENST00000322723 CENPCQ03188 943 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 PPFIA1Q13136 1202 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 TMOD4Q9NZQ9 345 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
NCL-201ENST00000322723 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
NCL-201ENST00000322723 ZDHHC24Q6UX98 284 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 KIRREL3Q8IZU9 778 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 TBC1D31Q96DN5 1066 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 FAM129AQ9BZQ8 928 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 BAIAP2L1Q9UHR4 511 aa12.87□□□□□ -0.35
NCL-201ENST00000322723 TCRBV5S1A1TA0A578 114 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 GOLGA8IPA6NC78 632 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 GOLGA8JA6NMD2 632 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 HLTFQ14527 1009 aaKnown RBP eCLIP12.86□□□□□ -0.354e-17■□□□□ 10
NCL-201ENST00000322723 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 NT5C1BQ96P26 610 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 POP1Q99575 1024 aaKnown RBP12.86□□□□□ -0.35
NCL-201ENST00000322723 TMBIM4Q9HC24 238 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 ZNF302Q9NR11 478 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 ESYT3A0FGR9 886 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 TP73O15350 636 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 CYP26A1O43174 497 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 MON1BQ7L1V2 547 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 TATDN2Q93075 761 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 NAP1L3Q99457 506 aaPredicted RBP12.86□□□□□ -0.35
NCL-201ENST00000322723 FAM114A2Q9NRY5 505 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 KRIT1O00522 736 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 HSF2BPO75031 334 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 PHF2O75151 1096 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 PRELID2Q8N945 189 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 KRT35Q92764 455 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 CABS1Q96KC9 395 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 CGRRF1Q99675 332 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 GRHL1Q9NZI5 618 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 TCEAL9Q9UHQ7 104 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 MROH7Q68CQ1 1323 aa12.86□□□□□ -0.35
NCL-201ENST00000322723 HSD17B3P37058 310 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 USP37Q86T82 979 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 CAPS2Q9BXY5 557 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 DDX47Q9H0S4 455 aaKnown RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 SEPT9Q9UHD8 586 aaPredicted RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 MYBL1P10243 752 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 TNFAIP8L3Q5GJ75 292 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 IFT81Q8WYA0 676 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 AP1M1Q9BXS5 423 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 UMODL1Q5DID0 1318 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 MARCKSL1P49006 195 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 NLRP11P59045 1033 aaKnown RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 CNTN2Q02246 1040 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 PTPRHQ9HD43 1115 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 CTDP1Q9Y5B0 961 aaPredicted RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 A6NNZ2 444 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 MSCO60682 206 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 FGGP02679 453 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 COMTP21964 271 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 CAPSQ13938 189 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 NEDD9Q14511 834 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 TUBB8Q3ZCM7 444 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 PRAMEF18Q5VWM3 479 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 SLFN12LQ6IEE8 588 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 TACO1Q9BSH4 297 aaKnown RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 LRRC19Q9H756 370 aa12.85□□□□□ -0.35
NCL-201ENST00000322723 ATXN2Q99700 1313 aaKnown RBP12.85□□□□□ -0.35
NCL-201ENST00000322723 FSCN2O14926 492 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 ADCY3O60266 1144 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 TTC27Q6P3X3 843 aa12.84□□□□□ -0.35
NCL-201ENST00000322723 PHF13Q86YI8 300 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms