RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 RAD51CO43502 376 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 DKC1O60832 514 aaKnown RBP eCLIP3.84□□□□□ -1.79
GEN1-201ENST00000317402 HLA-DOAP06340 250 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 RAP1GDS1P52306 607 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TBC1D8BQ0IIM8 1120 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PABPC4Q13310 644 aaKnown RBP eCLIP3.84□□□□□ -1.79
GEN1-201ENST00000317402 SUGP1Q8IWZ8 645 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 ENOX1Q8TC92 643 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 KRT35Q92764 455 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 HEMGNQ9BXL5 484 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 Q9H521 79 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 RAVER2Q9HCJ3 691 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 ZMYND8Q9ULU4 1186 aaPredicted RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 ASPMQ8IZT6 3477 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PTPRFP10586 1907 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 HTTP42858 3142 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 MAP3K7O43318 606 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 DIAPH2O60879 1101 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 OSTNP61366 133 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 MYBPC2Q14324 1141 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 R3HDM1Q15032 1099 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 HAUS3Q68CZ6 603 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 VSIG1Q86XK7 387 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 TEX9Q8N6V9 391 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 NLGN2Q8NFZ4 835 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 SH3TC1Q8TE82 1336 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 SPAG7O75391 227 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 ZNF76P36508 570 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 ARL1P40616 181 aaPredicted RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 NAPAP54920 295 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 MRPL28Q13084 256 aaKnown RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 RAPGEF1Q13905 1077 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 KRT72Q14CN4 511 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 CCDC117Q8IWD4 279 aaPredicted RBP3.84□□□□□ -1.79
GEN1-201ENST00000317402 NAT16Q8N8M0 369 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PPP1R14CQ8TAE6 165 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 KIFAP3Q92845 792 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 HVCN1Q96D96 273 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 FAM129AQ9BZQ8 928 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 EMC3Q9P0I2 261 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 EXPH5Q8NEV8 1989 aa3.84□□□□□ -1.79
GEN1-201ENST00000317402 PIEZO1Q92508 2521 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 WDR91A4D1P6 747 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 SMCO2A6NFE2 343 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 GOLGA8CPA6NN73 597 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 PFDN6O15212 129 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 NOL4O94818 638 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 PTPREP23469 700 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 HOXD13P35453 343 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 GCLCP48506 637 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 CCNHP51946 323 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 STAT2P52630 851 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 AMPD2Q01433 879 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 DRAP1Q14919 205 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 TAF5Q15542 800 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 VWA3BQ502W6 1294 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 TXNRD3NBQ6F5E7 133 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 CCDC26Q8TAB7 109 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 LNX1Q8TBB1 728 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 LZTS2Q9BRK4 669 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 SLC39A3Q9BRY0 314 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 OSBPL10Q9BXB5 764 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 MAK16Q9BXY0 300 aaKnown RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 CD209Q9NNX6 404 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 TBK1Q9UHD2 729 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 ZNF148Q9UQR1 794 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 GLI3P10071 1580 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 ACANP16112 2415 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 FLT1P17948 1338 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 TLN2Q9Y4G6 2542 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 CCDC78A2IDD5 438 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 GIPC1O14908 333 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 CFBP00751 764 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 PRKCIP41743 596 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 CEP78Q5JTW2 689 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 ELMSAN1Q6PJG2 1045 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 TLK2Q86UE8 772 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 PASD1Q8IV76 773 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 PIAS4Q8N2W9 510 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 ZNF713Q8N859 430 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 UBLCP1Q8WVY7 318 aaPredicted RBP3.84□□□□□ -1.8
GEN1-201ENST00000317402 AGBL1Q96MI9 1066 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 KRT23Q9C075 422 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 EPB41L5Q9HCM4 733 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 CEP72Q9P209 647 aa3.84□□□□□ -1.8
GEN1-201ENST00000317402 A0A0U1RQS6 177 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 GOLGA8SH3BPF8 625 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 STMND1H3BQB6 276 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 GOLGA8MH3BSY2 632 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PDE5AO76074 875 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CHRNB2P17787 502 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 RPL10P27635 214 aaKnown RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 ABCG1P45844 678 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 PDE1BQ01064 536 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CCDC122Q5T0U0 273 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 HIBCHQ6NVY1 386 aaPredicted RBP3.83□□□□□ -1.8
GEN1-201ENST00000317402 CCDC62Q6P9F0 684 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 CABP7Q86V35 215 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 IL31RAQ8NI17 732 aa3.83□□□□□ -1.8
GEN1-201ENST00000317402 OLIG1Q8TAK6 271 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms