RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 A6NNZ2 444 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 ZBTB42B2RXF5 422 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 ADCY6O43306 1168 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 INHAP05111 366 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 NPTX2P47972 431 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 POLGP54098 1239 aaPredicted RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 PEX3P56589 373 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 SOX10P56693 466 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 DMP1Q13316 513 aaPredicted RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 PLCB4Q15147 1175 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 PPP2R5EQ16537 467 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 TUBB8Q3ZCM7 444 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 MAP3K21Q5TCX8 1036 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 MAATS1Q7Z4T9 603 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 RHOT2Q8IXI1 618 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 BSNDQ8WZ55 320 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 NAP1L3Q99457 506 aaPredicted RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 CBWD1Q9BRT8 395 aa15.25■□□□□ 0.03
VRK3-201ENST00000316763 TTC7AQ9ULT0 858 aaPredicted RBP15.25■□□□□ 0.03
VRK3-201ENST00000316763 ESYT3A0FGR9 886 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 SLC16A4O15374 487 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 BUB1BO60566 1050 aaPredicted RBP15.24■□□□□ 0.03
VRK3-201ENST00000316763 MAFO75444 373 aaPredicted RBP15.24■□□□□ 0.03
VRK3-201ENST00000316763 LGALS2P05162 132 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 ABCB4P21439 1286 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 CNGA1P29973 690 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 CCND3P30281 292 aaPredicted RBP15.24■□□□□ 0.03
VRK3-201ENST00000316763 TNFAIP2Q03169 654 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 EPC2Q52LR7 807 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 TMEM161BQ8NDZ6 487 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 OLIG1Q8TAK6 271 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 SLC7A3Q8WY07 619 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 KCNN1Q92952 543 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 ZIM3Q96PE6 472 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 GNEQ9Y223 722 aaKnown RBP15.24■□□□□ 0.03
VRK3-201ENST00000316763 USP20Q9Y2K6 914 aa15.24■□□□□ 0.03
VRK3-201ENST00000316763 ZSCAN5CA6NGD5 496 aaPredicted RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 SART1O43290 800 aaKnown RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 LRRN2O75325 713 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 FAM153BP0C7A2 387 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 MARK3P27448 753 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 ARL2P36404 184 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 GCLMP48507 274 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 MXI1P50539 228 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 GUCY2FP51841 1108 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 DLG4P78352 724 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 HLTFQ14527 1009 aaKnown RBP eCLIP15.23■□□□□ 0.03
VRK3-201ENST00000316763 PTPROQ16827 1216 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 FAM153CQ494X1 144 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 FBXO46Q6PJ61 603 aaPredicted RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 CD302Q8IX05 232 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 AP1M1Q9BXS5 423 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 POLR3FQ9H1D9 316 aaPredicted RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 PLEKHA4Q9H4M7 779 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 ERAP1Q9NZ08 941 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 FAM153AQ9UHL3 310 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 IGKV6-21A0A0C4DH24 114 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 SHOX2O60902 331 aaPredicted RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 HADHBP55084 474 aaKnown RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 PPP3CAQ08209 521 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 PKN2Q16513 984 aaKnown RBP15.23■□□□□ 0.03
VRK3-201ENST00000316763 LRRC31Q6UY01 552 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 EXOC8Q8IYI6 725 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 IQCKQ8N0W5 287 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 LRRC45Q96CN5 670 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 OSGEPQ9NPF4 335 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 KCNG1Q9UIX4 513 aa15.23■□□□□ 0.03
VRK3-201ENST00000316763 CCDC169A6NNP5 214 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 TISP43B9A030 160 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 SEPT4O43236 478 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 HBP1O60381 514 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 AKR1A1P14550 325 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 HSPA9P38646 679 aaKnown RBP15.22■□□□□ 0.03
VRK3-201ENST00000316763 USP37Q86T82 979 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 ARHGEF19Q8IW93 802 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 OR6J1Q8NGC5 347 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 TMEM143Q96AN5 459 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 LENG1Q96BZ8 264 aaPredicted RBP15.22■□□□□ 0.03
VRK3-201ENST00000316763 THAP2Q9H0W7 228 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 CARD9Q9H257 536 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 KMT5AQ9NQR1 393 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
VRK3-201ENST00000316763 GOLGA6L10A0A0M3HER8 536 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 GAS2O43903 313 aaKnown RBP15.21■□□□□ 0.03
VRK3-201ENST00000316763 MMP3P08254 477 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 SCP2P22307 547 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 MFAP3P55082 362 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 MCCD1P59942 119 aaPredicted RBP15.21■□□□□ 0.03
VRK3-201ENST00000316763 TCEAL1Q15170 157 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 IFT74Q96LB3 600 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 CAPS2Q9BXY5 557 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 RNPEPQ9H4A4 650 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 HMX1Q9NP08 348 aaPredicted RBP15.21■□□□□ 0.03
VRK3-201ENST00000316763 TBX20Q9UMR3 447 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 ADGRA3Q8IWK6 1321 aa15.21■□□□□ 0.03
VRK3-201ENST00000316763 A6NJR5 290 aa15.21■□□□□ 0.02
VRK3-201ENST00000316763 BHMG1C9JSJ3 638 aaPredicted RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms