RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 KLHL30Q0D2K2 578 aa24.32■■□□□ 1.48
IRF3-201ENST00000309877 PPM1KQ8N3J5 372 aa24.32■■□□□ 1.48
IRF3-201ENST00000309877 EIF2AQ9BY44 585 aaKnown RBP24.32■■□□□ 1.48
IRF3-201ENST00000309877 ASB7Q9H672 318 aa24.32■■□□□ 1.48
IRF3-201ENST00000309877 ADGRG1Q9Y653 693 aa24.32■■□□□ 1.48
IRF3-201ENST00000309877 CENPFP49454 3210 aa24.32■■□□□ 1.48
IRF3-201ENST00000309877 F8VZ95 297 aa24.31■■□□□ 1.48
IRF3-201ENST00000309877 EIF4A3P38919 411 aaKnown RBP24.31■■□□□ 1.48
IRF3-201ENST00000309877 MFAP3P55082 362 aa24.31■■□□□ 1.48
IRF3-201ENST00000309877 SLC43A3Q8NBI5 491 aa24.31■■□□□ 1.48
IRF3-201ENST00000309877 MTMR12Q9C0I1 747 aa24.31■■□□□ 1.48
IRF3-201ENST00000309877 ARVCFO00192 962 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 IPO7O95373 1038 aaKnown RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 VNN1O95497 513 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 PLEKP08567 350 aaPredicted RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 FERP16591 822 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 SOX5P35711 763 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 SLC10A6Q3KNW5 377 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 HGSNATQ68CP4 663 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 TRAPPC11Q7Z392 1133 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 PPP1R13BQ96KQ4 1090 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 PI4K2AQ9BTU6 479 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 C1orf112Q9NSG2 853 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 BZW2Q9Y6E2 419 aaKnown RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 SSU72P8A0A1W2PR75 194 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 CLSTN1O94985 981 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 CCDC172P0C7W6 258 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 YARSP54577 528 aaKnown RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 NFX1Q12986 1120 aaKnown RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 NCOA4Q13772 614 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 IRF2BP2Q7Z5L9 587 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 CD302Q8IX05 232 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 EFCAB13Q8IY85 973 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 DHX38Q92620 1227 aaKnown RBP24.3■■□□□ 1.48
IRF3-201ENST00000309877 FAM81BQ96LP2 452 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 SEZ6LQ9BYH1 1024 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 TRPV6Q9H1D0 765 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 SNTG2Q9NY99 539 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 ST3GAL5Q9UNP4 418 aa24.3■■□□□ 1.48
IRF3-201ENST00000309877 AKR1B10O60218 316 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 GFPT2O94808 682 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 MAPK8IP2Q13387 824 aaPredicted RBP24.29■■□□□ 1.48
IRF3-201ENST00000309877 TRPC3Q13507 836 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 JADE1Q6IE81 842 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 CTU1Q7Z7A3 348 aaKnown RBP24.29■■□□□ 1.48
IRF3-201ENST00000309877 ACRBPQ8NEB7 543 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 HELQQ8TDG4 1101 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 TATDN2Q93075 761 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 IMPG2Q9BZV3 1241 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 OGDHLQ9ULD0 1010 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 FRMPD3Q5JV73 1810 aa24.29■■□□□ 1.48
IRF3-201ENST00000309877 EIF3CLB5ME19 914 aaKnown RBP24.28■■□□□ 1.48
IRF3-201ENST00000309877 GPR182O15218 404 aa24.28■■□□□ 1.48
IRF3-201ENST00000309877 CAND2O75155 1236 aa24.28■■□□□ 1.48
IRF3-201ENST00000309877 PNMA6AP0CW24 399 aaPredicted RBP24.28■■□□□ 1.48
IRF3-201ENST00000309877 TRIM71Q2Q1W2 868 aaKnown RBP24.28■■□□□ 1.48
IRF3-201ENST00000309877 TWF2Q6IBS0 349 aaKnown RBP24.28■■□□□ 1.48
IRF3-201ENST00000309877 EIF3CQ99613 913 aaKnown RBP24.28■■□□□ 1.48
IRF3-201ENST00000309877 GPR88Q9GZN0 384 aa24.28■■□□□ 1.48
IRF3-201ENST00000309877 PLEKHA5Q9HAU0 1116 aa24.28■■□□□ 1.48
IRF3-201ENST00000309877 FOXN3O00409 490 aaPredicted RBP24.27■■□□□ 1.48
IRF3-201ENST00000309877 NFICP08651 508 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 KRT83P78385 493 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 SPA17Q15506 151 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 ENOSF1Q7L5Y1 443 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 KAT5Q92993 513 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 HAUS4Q9H6D7 363 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 GOLGA6L9A6NEM1 432 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 MEFVO15553 781 aaPredicted RBP24.27■■□□□ 1.48
IRF3-201ENST00000309877 EVI5O60447 810 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 OFD1O75665 1012 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 HSPA8P11142 646 aaKnown RBP24.27■■□□□ 1.48
IRF3-201ENST00000309877 PRKCIP41743 596 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 KIF11P52732 1056 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 GCNT1Q02742 428 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 TMEM132DQ14C87 1099 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 FAM26DQ5JW98 314 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 FBXO47Q5MNV8 452 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 UBXN11Q5T124 520 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 REXO1L1PQ8IX06 675 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 ELMO3Q96BJ8 720 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 KREMEN1Q96MU8 473 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 APOL6Q9BWW8 343 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 NXF3Q9H4D5 531 aaKnown RBP24.27■■□□□ 1.48
IRF3-201ENST00000309877 CHST12Q9NRB3 414 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 HES2Q9Y543 173 aa24.27■■□□□ 1.48
IRF3-201ENST00000309877 CST3P01034 146 aaPredicted RBP24.26■■□□□ 1.47
IRF3-201ENST00000309877 CLCN1P35523 988 aa24.26■■□□□ 1.47
IRF3-201ENST00000309877 USP8P40818 1118 aa24.26■■□□□ 1.47
IRF3-201ENST00000309877 ZNF618Q5T7W0 954 aa24.26■■□□□ 1.47
IRF3-201ENST00000309877 NT5DC4Q86YG4 428 aa24.26■■□□□ 1.47
IRF3-201ENST00000309877 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.26■■□□□ 1.47
IRF3-201ENST00000309877 C2CD2Q9Y426 696 aa24.26■■□□□ 1.47
IRF3-201ENST00000309877 GHRP10912 638 aa24.25■■□□□ 1.47
IRF3-201ENST00000309877 PAK2Q13177 524 aa24.25■■□□□ 1.47
IRF3-201ENST00000309877 SGSM1Q2NKQ1 1148 aa24.25■■□□□ 1.47
IRF3-201ENST00000309877 SPOPLQ6IQ16 392 aa24.25■■□□□ 1.47
IRF3-201ENST00000309877 FBXO46Q6PJ61 603 aaPredicted RBP24.25■■□□□ 1.47
IRF3-201ENST00000309877 KIF12Q96FN5 646 aa24.25■■□□□ 1.47
IRF3-201ENST00000309877 C16orf45Q96MC5 204 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms