RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 TRAPPC11Q7Z392 1133 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 ZNF571Q7Z3V5 609 aaPredicted RBP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 ACP6Q9NPH0 428 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 KLK14Q9P0G3 267 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 DDX20Q9UHI6 824 aaKnown RBP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 RFX1P22670 979 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 SSTR3P32745 418 aaPredicted RBP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 GTF2H1P32780 548 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 CAP1Q01518 475 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 SLC18A3Q16572 532 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 TAF2Q6P1X5 1199 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 SYN2Q92777 582 aaPredicted RBP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 PSMB7Q99436 277 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 ARID3AQ99856 593 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 LACRTQ9GZZ8 138 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 PDZD7Q9H5P4 517 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 SNTG2Q9NY99 539 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 AIPL1Q9NZN9 384 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 MCF2P10911 925 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 CD19P15391 556 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 IRF5Q13568 498 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 PTGISQ16647 500 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 ZNF516Q92618 1163 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 STYXL1Q9Y6J8 313 aa11.97□□□□□ -0.49
TRIM59-201ENST00000309784 V9GYY5 206 aaPredicted RBP11.97□□□□□ -0.49
TRIM59-201ENST00000309784 LACTBL1A8MY62 500 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 MOCS3O95396 460 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 H2AFZP0C0S5 128 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 AKAP5P24588 427 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 MYL6P60660 151 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 SNX17Q15036 470 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 ZACNQ401N2 412 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 H2AFVQ71UI9 128 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 WDR49Q8IV35 697 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 CTNNBL1Q8WYA6 563 aaPredicted RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 CDY2AQ9Y6F7 541 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 PTPRJQ12913 1337 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 ITGB3P05106 788 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 ZSCAN20P17040 1043 aaPredicted RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 GUCY2FP51841 1108 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 CDK17Q00537 523 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 TMEM132DQ14C87 1099 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 GDF6Q6KF10 455 aaPredicted RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 CPSF3Q9UKF6 684 aaKnown RBP11.96□□□□□ -0.49
TRIM59-201ENST00000309784 PTCH2Q9Y6C5 1203 aa11.96□□□□□ -0.49
TRIM59-201ENST00000309784 KBTBD13C9JR72 458 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 CALCAP01258 141 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 TUBB4AP04350 444 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 NFICP08651 508 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 HOXD8P13378 290 aaPredicted RBP11.96□□□□□ -0.5
TRIM59-201ENST00000309784 HNRNPH3P31942 346 aaKnown RBP11.96□□□□□ -0.5
TRIM59-201ENST00000309784 HGSNATQ68CP4 663 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 SLC27A1Q6PCB7 646 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.5
TRIM59-201ENST00000309784 STARD7Q9NQZ5 370 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 MYO1AQ9UBC5 1043 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 REXO2Q9Y3B8 237 aaKnown RBP11.96□□□□□ -0.5
TRIM59-201ENST00000309784 ARID2Q68CP9 1835 aa11.96□□□□□ -0.5
TRIM59-201ENST00000309784 ZNF667Q5HYK9 610 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 JADE1Q6IE81 842 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 NOX5Q96PH1 765 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 PACSIN1Q9BY11 444 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 MYO6Q9UM54 1294 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 AGAP1Q9UPQ3 857 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 IL18RAPO95256 599 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 SGPL1O95470 568 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 WEE2P0C1S8 567 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 GHRP10912 638 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 AP3M2P53677 418 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 ITGA7Q13683 1181 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 IRF2BP2Q7Z5L9 587 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 CAPZA3Q96KX2 299 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 EIF2AQ9BY44 585 aaKnown RBP11.95□□□□□ -0.5
TRIM59-201ENST00000309784 CELF4Q9BZC1 486 aaKnown RBP11.95□□□□□ -0.5
TRIM59-201ENST00000309784 GTF2IRD1Q9UHL9 959 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 THAP12O43422 761 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 CST3P01034 146 aaPredicted RBP11.95□□□□□ -0.5
TRIM59-201ENST00000309784 HIC1Q14526 733 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 SLC47A2Q86VL8 602 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 LRRC37A2A6NM11 1700 aa11.95□□□□□ -0.5
TRIM59-201ENST00000309784 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 ZNF263O14978 683 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 C4BPAP04003 597 aaKnown RBP11.94□□□□□ -0.5
TRIM59-201ENST00000309784 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 PASD1Q8IV76 773 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 KREMEN1Q96MU8 473 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 AGPAT1Q99943 283 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 NFKBIZQ9BYH8 718 aa11.94□□□□□ -0.5
TRIM59-201ENST00000309784 NXF3Q9H4D5 531 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms