RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CCDC33Q8N5R6 958 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 ALG3Q92685 438 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 NLRP4Q96MN2 994 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 TTC1Q99614 292 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 HSD17B14Q9BPX1 270 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 PCDHA2Q9Y5H9 948 aa13.48□□□□□ -0.25
RETREG3-201ENST00000309428 P4HBP07237 508 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 PIK3CAP42336 1068 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 RANBP1P43487 201 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 TFAMQ00059 246 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 OVGP1Q12889 678 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 GRM1Q13255 1194 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 CHADLQ6NUI6 762 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 LRIG3Q6UXM1 1119 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 C15orf52Q6ZUT6 534 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 AGPAT1Q99943 283 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 SAYSD1Q9NPB0 183 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 MYOZ2Q9NPC6 264 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 PCDHB4Q9Y5E5 795 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 LUC7L3O95232 432 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 NQO1P15559 274 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 CNGA1P29973 690 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 CRYMQ14894 314 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 SLMAPQ14BN4 828 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 MSL3Q8N5Y2 521 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 NT5C1BQ96P26 610 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 IDI2Q9BXS1 227 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 SUGT1Q9Y2Z0 365 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 PSMD10O75832 226 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 ADRB2P07550 413 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 TROVE2P10155 538 aaKnown RBP eCLIP13.47□□□□□ -0.25
RETREG3-201ENST00000309428 RARRES1P49788 294 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 CNTN2Q02246 1040 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 RFFLQ8WZ73 363 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
RETREG3-201ENST00000309428 A0A1B0GUL6 1792 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 GJB1P08034 283 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 CTCFP49711 727 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 PSMD6Q15008 389 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 WDR44Q5JSH3 913 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 DCUN1D2Q6PH85 259 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 ARHGAP27Q6ZUM4 889 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 CROCCP2Q86T23 111 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 LRRN4Q8WUT4 740 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 GMCL1Q96IK5 515 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 PABPC3Q9H361 631 aaKnown RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 PAPPAQ13219 1627 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 VCAM1P19320 739 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 KRT17Q04695 432 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 STRN3Q13033 797 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 AGBL2Q5U5Z8 902 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 BSPRYQ5W0U4 402 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 ZNF564Q8TBZ8 553 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 INPP4AQ96PE3 977 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 TARS2Q9BW92 718 aaKnown RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 C1orf112Q9NSG2 853 aa13.46□□□□□ -0.25
RETREG3-201ENST00000309428 HERC5Q9UII4 1024 aaKnown RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 CNOT7Q9UIV1 285 aaKnown RBP13.46□□□□□ -0.25
RETREG3-201ENST00000309428 KITP10721 976 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 TATDN1Q6P1N9 297 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 TMEM154Q6P9G4 183 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 SYTL5Q8TDW5 730 aaPredicted RBP13.46□□□□□ -0.26
RETREG3-201ENST00000309428 MAML1Q92585 1016 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 TTC17Q96AE7 1141 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 HACL1Q9UJ83 578 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 PITPNM2Q9BZ72 1349 aa13.46□□□□□ -0.26
RETREG3-201ENST00000309428 INO80B-WBP1J3KQ70 363 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 ENTPD3O75355 529 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 NR3C2P08235 984 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 PPP2R5EQ16537 467 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 INO80BQ9C086 356 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 TMEM117Q9H0C3 514 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 NPHS2Q9NP85 383 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 TXLNGQ9NUQ3 528 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 SCOCQ9UIL1 159 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 COG5Q9UP83 839 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 DNAH12Q6ZR08 3092 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 UBTFL6P0CB48 400 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 FECHP22830 423 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 CCNHP51946 323 aaPredicted RBP13.45□□□□□ -0.26
RETREG3-201ENST00000309428 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 TRAF3IP3Q9Y228 551 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 ARL2BPQ9Y2Y0 163 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 MYH1P12882 1939 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 CFAP73A6NFT4 308 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 CIB2O75838 187 aa13.45□□□□□ -0.26
RETREG3-201ENST00000309428 PGK2P07205 417 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms