RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 VCPKMTQ9H867 229 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ARMT1Q9H993 441 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CABP5Q9NP86 173 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 XPNPEP3Q9NQH7 507 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 MCM9Q9NXL9 1143 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 CTNNA3Q9UI47 895 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ZMYM5Q9UJ78 669 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 TBX21Q9UL17 535 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ZNF214Q9UL59 606 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-201ENST00000308987 TMX2Q9Y320 296 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 RIPK3Q9Y572 518 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 SCN10AQ9Y5Y9 1956 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 MYH7BA7E2Y1 1941 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 ROBO3Q96MS0 1386 aa5.52□□□□□ -1.53
CKS1B-201ENST00000308987 SYNRGQ9UMZ2 1314 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ATG2AQ2TAZ0 1938 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 PTPDC1A2A3K4 754 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 BECN2A8MW95 431 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 UPK3BL1B0FP48 263 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 UPK3BL2E5RIL1 263 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 K7ESM1 405 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 OVOL3O00110 214 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 VWA5AO00534 786 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MPHOSPH10O00566 681 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CCP110O43303 1012 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 JAK2O60674 1132 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 IGSF3O75054 1194 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 P4HBP07237 508 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 FCER1AP12319 257 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 EEF2P13639 858 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TNFRSF1AP19438 455 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CDK7P50613 346 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 YARSP54577 528 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 RPS26P62854 115 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TPM4P67936 248 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 NCBP1Q09161 790 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 SCRN1Q12765 414 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MAP3K12Q12852 859 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 SNW1Q13573 536 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 PTPN14Q15678 1187 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 SLC14A2Q15849 920 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CAMK4Q16566 473 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TPD52L1Q16890 204 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TSNAXIP1Q2TAA8 658 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TMEM240Q5SV17 173 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ZFYVE27Q5T4F4 411 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 SLC9C2Q5TAH2 1124 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 C12orf60Q5U649 245 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TAF3Q5VWG9 929 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 FAM173BQ6P4H8 233 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TMEM179Q6ZVK1 233 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ANKRD33Q7Z3H0 272 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 RIOX2Q8IUF8 465 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ELOA2Q8IYF1 753 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 C17orf53Q8N3J3 647 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MB21D1Q8N884 522 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC150Q8NCX0 1101 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CACTINQ8WUQ7 758 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MRPS27Q92552 414 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ACSF2Q96CM8 615 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 RNPC3Q96LT9 517 aaKnown RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 TIGD1Q96MW7 591 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 NUP88Q99567 741 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 KATNBL1Q9H079 304 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MROH8Q9H579 483 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 PAG1Q9NWQ8 432 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 KLHL3Q9UH77 587 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 CORINQ9Y5Q5 1042 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MORC2Q9Y6X9 1032 aaPredicted RBP5.51□□□□□ -1.53
CKS1B-201ENST00000308987 MYO15AQ9UKN7 3530 aa5.51□□□□□ -1.53
CKS1B-201ENST00000308987 ASTN1O14525 1302 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 MYH6P13533 1939 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 COL4A4P53420 1690 aaPredicted RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 TANC1Q9C0D5 1861 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 FAM237AA0A1B0GTK4 181 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 RBM47A0AV96 593 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 E7EWF7 191 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 GOLIM4O00461 696 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 IKBKBO14920 756 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 WDR46O15213 610 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 RNF113AO15541 343 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 MBD4O95243 580 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 CTDNEP1O95476 244 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 TIMP1P01033 207 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 ACRP10323 421 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 RARBP10826 455 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 RAG1P15918 1043 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 RPL10P27635 214 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 PDIA3P30101 505 aaKnown RBP5.5□□□□□ -1.53
CKS1B-201ENST00000308987 ADD2P35612 726 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 STAT3P40763 770 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 KCNC1P48547 511 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 ACLYP53396 1101 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 ICA1Q05084 483 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 STK3Q13188 491 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 TMEM63BQ5T3F8 832 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 C16orf86Q6ZW13 317 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 CERS3Q8IU89 383 aa5.5□□□□□ -1.53
CKS1B-201ENST00000308987 PHACTR4Q8IZ21 702 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms