RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 LRG1P02750 347 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 FOXC1Q12948 553 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 TFDP1Q14186 410 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 MXD4Q14582 209 aaPredicted RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 AMHR2Q16671 573 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 SLC27A1Q6PCB7 646 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 Q6ZS52 159 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 DHX32Q7L7V1 743 aaKnown RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 DEPDC1BQ8WUY9 529 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 TCEAL4Q96EI5 215 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 ASB16Q96NS5 453 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 RBM12Q9NTZ6 932 aaKnown RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 VPS54Q9P1Q0 977 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 WRAP73Q9P2S5 460 aaPredicted RBP13.13□□□□□ -0.31
SMIM4-201ENST00000307106 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
SMIM4-201ENST00000307106 DENND4CQ5VZ89 1909 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 KIAA1549LQ6ZVL6 1849 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 CYP3A7-CYP3A51PA0A087WV96 503 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 TMEM8BA6NDV4 472 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 ZNF263O14978 683 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 EPN2O95208 641 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 P4HBP07237 508 aaKnown RBP13.12□□□□□ -0.31
SMIM4-201ENST00000307106 FGFR3P22607 806 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 CYP3A7P24462 503 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
SMIM4-201ENST00000307106 AKAP17AQ02040 695 aaKnown RBP13.12□□□□□ -0.31
SMIM4-201ENST00000307106 SPIRE1Q08AE8 756 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 WDR5BQ86VZ2 330 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 CORO1BQ9BR76 489 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 TMEM121BQ9BXQ6 578 aaPredicted RBP13.12□□□□□ -0.31
SMIM4-201ENST00000307106 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
SMIM4-201ENST00000307106 C2orf42Q9NWW7 574 aa13.12□□□□□ -0.31
SMIM4-201ENST00000307106 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 WDR27A2RRH5 827 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 SRRM3A6NNA2 597 aaPredicted RBP13.11□□□□□ -0.31
SMIM4-201ENST00000307106 PTGESO14684 152 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 ZNF197O14709 1029 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 THP07101 528 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 HOXC13P31276 330 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 VIPR2P41587 438 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 NOVA1P51513 510 aaKnown RBP13.11□□□□□ -0.31
SMIM4-201ENST00000307106 MLLT6P55198 1093 aaPredicted RBP13.11□□□□□ -0.31
SMIM4-201ENST00000307106 POU5F1BQ06416 359 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 PPP2R5CQ13362 524 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 CAPSQ13938 189 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 XKR9Q5GH70 373 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 RNF43Q68DV7 783 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 C1orf228Q6PIY5 440 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 LRSAM1Q6UWE0 723 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
SMIM4-201ENST00000307106 OTUD6AQ7L8S5 288 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 CSGALNACT1Q8TDX6 532 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 SMARCD2Q92925 531 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 COL26A1Q96A83 441 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 MSANTD3Q96H12 275 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 ZSWIM3Q96MP5 696 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 LXNQ9BS40 222 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 ADAM33Q9BZ11 813 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 C22orf23Q9BZE7 217 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 ANO2Q9NQ90 1003 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 XPNPEP1Q9NQW7 623 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 DDX25Q9UHL0 483 aaKnown RBP13.11□□□□□ -0.31
SMIM4-201ENST00000307106 VAV3Q9UKW4 847 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 LHX6Q9UPM6 363 aa13.11□□□□□ -0.31
SMIM4-201ENST00000307106 SLC38A8A6NNN8 435 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ARNTLO00327 626 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 PRRG1O14668 218 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 MICAL2O94851 1124 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 SPINK2P20155 84 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 HOXA6P31267 233 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ELF1P32519 619 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 CCR2P41597 374 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 RAP1GAPP47736 663 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 NLRP5P59047 1200 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 RING1Q06587 406 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ZNF252P-AS1Q0IIN9 211 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 NAB2Q15742 525 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 WDR44Q5JSH3 913 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 DGKKQ5KSL6 1271 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 PLA2G2CQ5R387 149 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ANKS3Q6ZW76 656 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ZNF461Q8TAF7 563 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ASAP3Q8TDY4 903 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 DDX27Q96GQ7 796 aaKnown RBP13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ESYT1Q9BSJ8 1104 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
SMIM4-201ENST00000307106 NCANO14594 1321 aa13.1□□□□□ -0.31
SMIM4-201ENST00000307106 AKAP13Q12802 2813 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms