RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 ACO1P21399 889 aaKnown RBP20.85■□□□□ 0.93
HOXC4-201ENST00000303406 FAM193AP78312 1265 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 CASP8Q14790 479 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 CLEC16AQ2KHT3 1053 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 EFCAB12Q6NXP0 572 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 TRIM72Q6ZMU5 477 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 GPR142Q7Z601 462 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 RHPN2Q8IUC4 686 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 PI4K2AQ9BTU6 479 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 PRMT7Q9NVM4 692 aaPredicted RBP20.85■□□□□ 0.93
HOXC4-201ENST00000303406 CTTNBP2NLQ9P2B4 639 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 COG5Q9UP83 839 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 TNFSF13BQ9Y275 285 aa20.85■□□□□ 0.93
HOXC4-201ENST00000303406 CEP104O60308 925 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 PPFIA4O75335 1185 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 CLSTN1O94985 981 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 CLTAP09496 248 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 TAF3Q5VWG9 929 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 PLEKHH3Q7Z736 793 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 TRIM11Q96F44 468 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 GOLPH3Q9H4A6 298 aa20.84■□□□□ 0.93
HOXC4-201ENST00000303406 SLC15A5A6NIM6 579 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 SNAI1O95863 264 aaPredicted RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 MYBL1P10243 752 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 KRT5P13647 590 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 PHKA2P46019 1235 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 MBTD1Q05BQ5 628 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 TMEM63BQ5T3F8 832 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 ATF7IP2Q5U623 682 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 LMBRD2Q68DH5 695 aaPredicted RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 EIF1ADQ8N9N8 165 aaKnown RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 AENQ8WTP8 325 aaKnown RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 MAML3Q96JK9 1138 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 TCHPQ9BT92 498 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 RNPEPQ9H4A4 650 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 AVENQ9NQS1 362 aaPredicted RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 GDF3Q9NR23 364 aa20.83■□□□□ 0.93
HOXC4-201ENST00000303406 DMGDHQ9UI17 866 aaKnown RBP20.83■□□□□ 0.93
HOXC4-201ENST00000303406 UNGP13051 313 aaPredicted RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 INSRRP14616 1297 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 DNA2P51530 1060 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 NOP14P78316 857 aaKnown RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 NCOA4Q13772 614 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 SMC1AQ14683 1233 aaKnown RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 PPP2R5EQ16537 467 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 IFT20Q8IY31 132 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 UBR7Q8N806 425 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 OR5B17Q8NGF7 314 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.83■□□□□ 0.927e-17■■■■■ 230
HOXC4-201ENST00000303406 NAP1L3Q99457 506 aaPredicted RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 IMPG2Q9BZV3 1241 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 ABHD16BQ9H3Z7 469 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 APOBEC3GQ9HC16 384 aaKnown RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 ZCCHC17Q9NP64 241 aaKnown RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.83■□□□□ 0.922e-7■■■■■ 93.2
HOXC4-201ENST00000303406 SLC5A4Q9NY91 659 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 NOC2LQ9Y3T9 749 aaKnown RBP20.83■□□□□ 0.92
HOXC4-201ENST00000303406 ALG6Q9Y672 507 aa20.83■□□□□ 0.92
HOXC4-201ENST00000303406 TTLL13PA6NNM8 815 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 B4GALT4O60513 344 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 PHACTR2O75167 634 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 CELF2O95319 508 aaKnown RBP20.82■□□□□ 0.92
HOXC4-201ENST00000303406 ASS1P00966 412 aaKnown RBP20.82■□□□□ 0.92
HOXC4-201ENST00000303406 CYP1A1P04798 512 aaPredicted RBP20.82■□□□□ 0.92
HOXC4-201ENST00000303406 NNTQ13423 1086 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 KYAT1Q16773 422 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 DUOXA2Q1HG44 320 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 GLIPR1L2Q4G1C9 344 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 IQSEC1Q6DN90 963 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 EMBQ6PCB8 327 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 DPP9Q86TI2 863 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 TRAPPC12Q8WVT3 735 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 FAXDC2Q96IV6 333 aa20.82■□□□□ 0.92
HOXC4-201ENST00000303406 IL18RAPO95256 599 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 CLCN3P51790 818 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 EPHB4P54760 987 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 TNFAIP2Q03169 654 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 ZBTB33Q86T24 672 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 ZNF564Q8TBZ8 553 aaPredicted RBP20.81■□□□□ 0.92
HOXC4-201ENST00000303406 HDAC7Q8WUI4 952 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 AFG1LQ8WV93 481 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 ZNF653Q96CK0 615 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 NLRP4Q96MN2 994 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 TINF2Q9BSI4 451 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 C16orf70Q9BSU1 422 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 WNT8AQ9H1J5 351 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 SLITRK6Q9H5Y7 841 aa20.81■□□□□ 0.92
HOXC4-201ENST00000303406 INO80B-WBP1J3KQ70 363 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 HARSP12081 509 aaKnown RBP20.8■□□□□ 0.92
HOXC4-201ENST00000303406 HSPA6P17066 643 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 CTNNA2P26232 953 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 TMOD1P28289 359 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 TNFSF9P41273 254 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 ADCYAP1R1P41586 468 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 ZNF132P52740 706 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 CENPCQ03188 943 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 ZNF568Q3ZCX4 644 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 UBL4BQ8N7F7 174 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 KRT12Q99456 494 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms