RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NYXQ9GZU5 481 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 G3BP2Q9UN86 482 aaKnown RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ZMYM2Q9UBW7 1377 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 C2orf71A6NGG8 1288 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 CAPN9O14815 690 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 RALAP11233 206 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 P3H1Q32P28 736 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 FAM182AQ5T1J6 154 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 GPATCH4Q5T3I0 446 aaKnown RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 SNX30Q5VWJ9 437 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 CYTH2Q99418 400 aa15.6■□□□□ 0.09
COL6A2-201ENST00000300527 NAP1L4Q99733 375 aaKnown RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
COL6A2-201ENST00000300527 A0A1W2PPM1 405 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 DCTN3O75935 186 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 GGPS1O95749 300 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 MAGEA4P43358 317 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SERPINB4P48594 390 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 GPSM2P81274 684 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 KIF22Q14807 665 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 KPNB1Q14974 876 aaKnown RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 FASTKD3Q14CZ7 662 aaKnown RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SIX1Q15475 284 aaPredicted RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SLC1A5Q15758 541 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 TNFAIP8L3Q5GJ75 292 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 BORCS6Q96GS4 357 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 WHRNQ9P202 907 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 MEIS2O14770 477 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 AHCYL1O43865 530 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 ATF7P17544 494 aaPredicted RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 MARK3P27448 753 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 CETN2P41208 172 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 PPP1R18Q6NYC8 613 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 LVRNQ6Q4G3 990 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 CPA5Q8WXQ8 436 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SYT11Q9BT88 431 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 TRAIPQ9BWF2 469 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 TMEM117Q9H0C3 514 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 ARHGEF35A5YM69 484 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 ZBED4O75132 1171 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 BAG2O95816 211 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 ETS1P14921 441 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 GAP43P17677 238 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 RANBP1P43487 201 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 MXI1P50539 228 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 VAMP7P51809 220 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 NOP14P78316 857 aaKnown RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 CWF19L1Q69YN2 538 aaKnown RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 CCNJLQ8IV13 435 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 PASD1Q8IV76 773 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 ASAP3Q8TDY4 903 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 EPS8L1Q8TE68 723 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SCG3Q8WXD2 468 aaKnown RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 GRAMD1AQ96CP6 724 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 SLC7A6OSQ96CW6 309 aaPredicted RBP15.59■□□□□ 0.09
COL6A2-201ENST00000300527 FGD4Q96M96 766 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 GBP5Q96PP8 586 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 DAGLAQ9Y4D2 1042 aa15.59■□□□□ 0.09
COL6A2-201ENST00000300527 DLEC1Q9Y238 1755 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 GYG2O15488 501 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 RASA3Q14644 834 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 RASIP1Q5U651 963 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 FYB2Q5VWT5 728 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 PDCD7Q8N8D1 485 aaKnown RBP15.58■□□□□ 0.09
COL6A2-201ENST00000300527 LRRC4BQ9NT99 713 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 STOML1Q9UBI4 398 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 LRRC42Q9Y546 428 aa15.58■□□□□ 0.09
COL6A2-201ENST00000300527 DCCP43146 1447 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 GDF11O95390 407 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 FESP07332 822 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 T-ENOLP0DO92 83 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 ZNF720Q7Z2F6 126 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 PHC3Q8NDX5 983 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 GRID1Q9ULK0 1009 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 ZNF148Q9UQR1 794 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 ANKRD36CQ5JPF3 1778 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 ZBED8Q8IZ13 594 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 CEP120Q8N960 986 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 PPFIBP2Q8ND30 876 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 ACSF2Q96CM8 615 aaPredicted RBP15.58■□□□□ 0.08
COL6A2-201ENST00000300527 PI4K2AQ9BTU6 479 aa15.58■□□□□ 0.08
COL6A2-201ENST00000300527 LIN7AO14910 233 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-201ENST00000300527 TP73O15350 636 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 GAS7O60861 476 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 ATP5HO75947 161 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 PCNX4Q63HM2 1172 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 FBXO11Q86XK2 927 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 TOPORSQ9NS56 1045 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-201ENST00000300527 KRT10P13645 584 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 RBM5P52756 815 aaKnown RBP eCLIP15.57■□□□□ 0.08
COL6A2-201ENST00000300527 OTOAQ7RTW8 1153 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 RBBP8NLQ8NC74 664 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-201ENST00000300527 RFWD2Q8NHY2 731 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 LRRC19Q9H756 370 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 KIAA1586Q9HCI6 787 aa15.57■□□□□ 0.08
COL6A2-201ENST00000300527 FBXO6Q9NRD1 293 aaPredicted RBP15.57■□□□□ 0.08
COL6A2-201ENST00000300527 SKIP12755 728 aa15.56■□□□□ 0.08
COL6A2-201ENST00000300527 CACNA2D1P54289 1103 aa15.56■□□□□ 0.08
COL6A2-201ENST00000300527 BMT2Q1RMZ1 405 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms