RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ASAP2O43150 1006 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SYTL3Q4VX76 610 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BFARQ9NZS9 450 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MYO1DO94832 1006 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RALAP11233 206 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 HSPA9P38646 679 aaKnown RBP14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SGO1Q5FBB7 561 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ELMSAN1Q6PJG2 1045 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CLEC4GQ6UXB4 293 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 C11orf96Q7Z7L8 435 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EFHBQ8N7U6 833 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZFATQ9P243 1243 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TRAF3IP3Q9Y228 551 aa14.3□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ANO9A1A5B4 782 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PHF20L1A8MW92 1017 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ENO3P13929 434 aaPredicted RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PGM1P36871 562 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RIN2Q8WYP3 895 aaPredicted RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CFAP74Q9C0B2 1584 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ORC1Q13415 861 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TTC23LQ6PF05 361 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KCNF1Q9H3M0 494 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZBTB12Q9Y330 459 aaPredicted RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AMHR2Q16671 573 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MFSD14CQ5VZR4 134 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PABPC5Q96DU9 382 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SHCBP1LQ9BZQ2 653 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 PCDHA10Q9Y5I2 948 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 STAT5BP51692 787 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CDK17Q00537 523 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 LRRC71Q8N4P6 559 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 APPL2Q8NEU8 664 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 C9orf72Q96LT7 481 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TEX12Q9BXU0 123 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SENP2Q9HC62 589 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SAMD9LQ8IVG5 1584 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 NR1H3Q13133 447 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MUC3BQ9H195 1237 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EML4Q9HC35 981 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CHMP2BQ9UQN3 213 aa14.29□□□□□ -0.12
CHRFAM7A-201ENST00000299847 HMOX2P30519 316 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 YAF2Q8IY57 180 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CYGBQ8WWM9 190 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DCUN1D1Q96GG9 259 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CAPN10Q9HC96 672 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SUPT3HB4E1H0 165 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AKT1P31749 480 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 IFNEQ86WN2 208 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 APOBEC3FQ8IUX4 373 aaKnown RBP14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CELF4Q9BZC1 486 aaKnown RBP14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RAB6BQ9NRW1 208 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZNF212Q9UDV6 495 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ATP5HO75947 161 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 WEE2P0C1S8 567 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RRM2BQ7LG56 351 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MFN1Q8IWA4 741 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 GALNT4Q8N4A0 578 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ARIH2O95376 493 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 RPS6P62753 249 aaKnown RBP14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BAATQ14032 418 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ADGRL3Q9HAR2 1447 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 EYA4O95677 639 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AVPR1AP37288 418 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FBXW10Q5XX13 1052 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FRMD5Q7Z6J6 570 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BTN2A2Q8WVV5 523 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 OSBPL5Q9H0X9 879 aaPredicted RBP14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TADA2AO75478 443 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DEUP1Q05D60 604 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KRT72Q14CN4 511 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AARS2Q5JTZ9 985 aaKnown RBP14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SPATA21Q7Z572 469 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 TASP1Q9H6P5 420 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 STOML1Q9UBI4 398 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CDV3Q9UKY7 258 aaKnown RBP14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 ZNF711Q9Y462 761 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 DYNC1LI2O43237 492 aaPredicted RBP14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MAN1A2O60476 641 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 HIC1Q14526 733 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 LAYNQ6UX15 382 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 BTNL9Q6UXG8 535 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 CDR2LQ86X02 465 aaPredicted RBP14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 MICALL2Q8IY33 904 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 SNX31Q8N9S9 440 aa14.27□□□□□ -0.12
CHRFAM7A-201ENST00000299847 AKAP10O43572 662 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ACTR2P61160 394 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ANO5Q75V66 913 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 KIF2BQ8N4N8 673 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ARHGAP10A1A4S6 786 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 ANGPT2O15123 496 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 PDGFRAP16234 1089 aa14.27□□□□□ -0.13
CHRFAM7A-201ENST00000299847 USP10Q14694 798 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms