RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 UGCGQ16739 394 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 KMT5BQ4FZB7 885 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 ZC3H14Q6PJT7 736 aaKnown RBP23.02■■□□□ 1.28
SMCO4-201ENST00000298966 OTUD6AQ7L8S5 288 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 GPBP1Q86WP2 473 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 CMASQ8NFW8 434 aaPredicted RBP23.02■■□□□ 1.28
SMCO4-201ENST00000298966 RIN2Q8WYP3 895 aaPredicted RBP23.02■■□□□ 1.28
SMCO4-201ENST00000298966 FDXACB1Q9BRP7 624 aaPredicted RBP23.02■■□□□ 1.28
SMCO4-201ENST00000298966 CA14Q9ULX7 337 aa23.02■■□□□ 1.28
SMCO4-201ENST00000298966 MYH11P35749 1972 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 ARID2Q68CP9 1835 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 MEIS3P2A8K0S8 358 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 KRT18P05783 430 aaKnown RBP23.01■■□□□ 1.27
SMCO4-201ENST00000298966 DHX8Q14562 1220 aaKnown RBP23.01■■□□□ 1.27
SMCO4-201ENST00000298966 TARBP2Q15633 366 aaKnown RBP23.01■■□□□ 1.27
SMCO4-201ENST00000298966 MTERF2Q49AM1 385 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 CYP26C1Q6V0L0 522 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 CATSPER4Q7RTX7 472 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 LUZP1Q86V48 1076 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 ZNF410Q86VK4 478 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 RSAD2Q8WXG1 361 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 NXPE3Q969Y0 559 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 FAM193BQ96PV7 902 aaPredicted RBP23.01■■□□□ 1.27
SMCO4-201ENST00000298966 BHMT2Q9H2M3 363 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 TBC1D17Q9HA65 648 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 MAN1C1Q9NR34 630 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 SEPT9Q9UHD8 586 aaPredicted RBP23.01■■□□□ 1.27
SMCO4-201ENST00000298966 DPP7Q9UHL4 492 aa23.01■■□□□ 1.27
SMCO4-201ENST00000298966 A0A087WWV3 80 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 ARHGEF35A5YM69 484 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 LILRB3O75022 631 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 ALDH2P05091 517 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 ZNF280BQ86YH2 543 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 DNAJC19Q96DA6 116 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 CCDC43Q96MW1 224 aaKnown RBP23■■□□□ 1.27
SMCO4-201ENST00000298966 TMEM175Q9BSA9 504 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 WDR6Q9NNW5 1121 aaKnown RBP23■■□□□ 1.27
SMCO4-201ENST00000298966 ODF2LQ9ULJ1 636 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 SSX2IPQ9Y2D8 614 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 FAN1Q9Y2M0 1017 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 PPME1Q9Y570 386 aa23■■□□□ 1.27
SMCO4-201ENST00000298966 FANCMQ8IYD8 2048 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 DOCK8Q8NF50 2099 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 CCDC195A0A1B0GUA6 201 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 FRMD3A2A2Y4 597 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 N4BP1O75113 896 aaKnown RBP22.99■■□□□ 1.27
SMCO4-201ENST00000298966 KIF20AO95235 890 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 URODP06132 367 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 ADH1AP07327 375 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 SRFP11831 508 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 GAP43P17677 238 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 BMP6P22004 513 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 CASP1P29466 404 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 CCDC173Q0VFZ6 552 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 SLC44A3Q8N4M1 653 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 PPP1R9BQ96SB3 815 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 RHOBTB2Q9BYZ6 727 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 EPS15L1Q9UBC2 864 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 CLUHO75153 1309 aa22.99■■□□□ 1.27
SMCO4-201ENST00000298966 C2CD2LO14523 706 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 INPPL1O15357 1258 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 B4GALT3O60512 393 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 DDHD2O94830 711 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 GUCY2CP25092 1073 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 YWHABP31946 246 aaKnown RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 MYL5Q02045 173 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 EHHADHQ08426 723 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 XKR3Q5GH77 459 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 PHLDB3Q6NSJ2 640 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 RHPN2Q8IUC4 686 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 DHX40Q8IX18 779 aaKnown RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 ENOX1Q8TC92 643 aaKnown RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 RUBCNQ92622 972 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 NIFKQ9BYG3 293 aaKnown RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 PANK4Q9NVE7 773 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 KANSL3Q9P2N6 904 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 SUCLA2Q9P2R7 463 aaPredicted RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 SEL1LQ9UBV2 794 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 PCDHB2Q9Y5E7 798 aa22.98■■□□□ 1.27
SMCO4-201ENST00000298966 TPRP12270 2363 aaKnown RBP22.98■■□□□ 1.27
SMCO4-201ENST00000298966 IGKV6-21A0A0C4DH24 114 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 TBCAO75347 108 aaKnown RBP22.97■■□□□ 1.27
SMCO4-201ENST00000298966 SOD2P04179 222 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 ISM2Q6H9L7 571 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 RINT1Q6NUQ1 792 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 FOXR2Q6PJQ5 311 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 C1orf186Q6ZWK4 172 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 DYMQ7RTS9 669 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 DHTKD1Q96HY7 919 aaPredicted RBP22.97■■□□□ 1.27
SMCO4-201ENST00000298966 PDLIM2Q96JY6 352 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 RPS6KC1Q96S38 1066 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 MYADMQ96S97 322 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 RSAD1Q9HA92 442 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 SIT1Q9Y3P8 196 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 COL4A3BPQ9Y5P4 624 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 CNTNAP2Q9UHC6 1331 aa22.97■■□□□ 1.27
SMCO4-201ENST00000298966 EPG5Q9HCE0 2579 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 CACNA1IQ9P0X4 2223 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 NRP1O14786 923 aa22.96■■□□□ 1.27
SMCO4-201ENST00000298966 PSMA7O14818 248 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms