RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MAP4K3Q8IVH8 894 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SMYD4Q8IYR2 804 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 TMEM199Q8N511 208 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 DEPTORQ8TB45 409 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SCFD1Q8WVM8 642 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 IFT74Q96LB3 600 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SCLT1Q96NL6 688 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 ACO2Q99798 780 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 EIF2AQ9BY44 585 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 INO80BQ9C086 356 aaPredicted RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 CXCL16Q9H2A7 254 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 ZHX3Q9H4I2 956 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PDZD7Q9H5P4 517 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PTPRHQ9HD43 1115 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SLC39A2Q9NP94 309 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 AGPAT5Q9NUQ2 364 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SEL1LQ9UBV2 794 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 PRKAG2Q9UGJ0 569 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 MAN1B1Q9UKM7 699 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 TBX20Q9UMR3 447 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 NR2E3Q9Y5X4 410 aa6.48□□□□□ -1.37
SSX3-201ENST00000298396 SPTBN5Q9NRC6 3674 aaKnown RBP6.48□□□□□ -1.37
SSX3-201ENST00000298396 REV3LO60673 3130 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 A0A1B0GUA9 196 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 C9IYK1 514 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ACKR2O00590 384 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ENPP3O14638 875 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 TGFB1I1O43294 461 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 PARNO95453 639 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 PIGRP01833 764 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 SFPQP23246 707 aaKnown RBP eCLIP6.47□□□□□ -1.37
SSX3-201ENST00000298396 ADSSP30520 456 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 GATMP50440 423 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 EFNA5P52803 228 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 WDR5P61964 334 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 FAM189BP81408 668 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 CDC42EP1Q00587 391 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 AMPD3Q01432 767 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 NFX1Q12986 1120 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 MORC3Q14149 939 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 KCNB1Q14721 858 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 SHHQ15465 462 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 BMT2Q1RMZ1 405 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.47□□□□□ -1.37
SSX3-201ENST00000298396 C4orf17Q53FE4 359 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ZBTB41Q5SVQ8 909 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 L1TD1Q5T7N2 865 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 KANK3Q6NY19 840 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 OTOP2Q7RTS6 562 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 CATSPER4Q7RTX7 472 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ZBTB8OSQ8IWT0 167 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 FAM178BQ8IXR5 827 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 CCDC65Q8IXS2 484 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 TMEM192Q8IY95 271 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 TMEM130Q8N3G9 435 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 USP38Q8NB14 1042 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 SMG8Q8ND04 991 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 ZNF507Q8TCN5 953 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 HERVK_113Q902F9 699 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 SEPT8Q92599 483 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 COL26A1Q96A83 441 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 PRIMPOLQ96LW4 560 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 MED15Q96RN5 788 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 ADAM2Q99965 735 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 C2orf49Q9BVC5 232 aaPredicted RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 TARS2Q9BW92 718 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 LRRC27Q9C0I9 530 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 C2orf40Q9H1Z8 148 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 KCTD10Q9H3F6 313 aa6.47□□□□□ -1.37
SSX3-201ENST00000298396 MRPL44Q9H9J2 332 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 RC3H2Q9HBD1 1191 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 PRMT7Q9NVM4 692 aaPredicted RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 LARSQ9P2J5 1176 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 PIN4Q9Y237 131 aaKnown RBP6.47□□□□□ -1.37
SSX3-201ENST00000298396 GOLGA6L22H0YM25 854 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 K7ERI5 159 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 BIN1O00499 593 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 GPR182O15218 404 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 EIF3DO15371 548 aaKnown RBP eCLIP6.46□□□□□ -1.38
SSX3-201ENST00000298396 B4GALT3O60512 393 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 ARHGEF15O94989 841 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 GCNT3O95395 438 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 NPTXRO95502 500 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 MBD3O95983 291 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 PFKMP08237 780 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 SNRPBP14678 240 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 BMP8BP34820 402 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 PRCPP42785 496 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 AFF1P51825 1210 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 PMS1P54277 932 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 PRPF4BQ13523 1007 aaKnown RBP6.46□□□□□ -1.38
SSX3-201ENST00000298396 MAPK6Q16659 721 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 KLHL40Q2TBA0 621 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 ZCWPW2Q504Y3 356 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 COBLL1Q53SF7 1204 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 CLLU1OSQ5K130 101 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 ATF7IP2Q5U623 682 aa6.46□□□□□ -1.38
SSX3-201ENST00000298396 ISM2Q6H9L7 571 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms