RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 LRRC74BQ6ZQY2 392 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF804AQ7Z570 1209 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 PRUNE1Q86TP1 453 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 LRRC47Q8N1G4 583 aaKnown RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 DTNBP1Q96EV8 351 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 GPCPD1Q9NPB8 672 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 STRCP1A6NGW2 1772 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SPATA31A5Q5VU36 1347 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SPATA31A6Q5VVP1 1343 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SPATA31A7Q8IWB4 1347 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MYH14Q7Z406 1995 aaKnown RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ATMINO43313 823 aaPredicted RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SPAG7O75391 227 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SLC34A1Q06495 639 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 SLC15A2Q16348 729 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ACSBG2Q5FVE4 666 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF746Q6NUN9 644 aaPredicted RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MOXD1Q6UVY6 613 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 CLNKQ7Z7G1 428 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MYLK4Q86YV6 388 aaPredicted RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MAIP1Q8WWC4 291 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 PTPRN2Q92932 1015 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 FAM163AQ96GL9 167 aaPredicted RBP14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 BTBD6Q96KE9 485 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 PCDHB18PQ96TA0 734 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ZCWPW1Q9H0M4 648 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 MTMR4Q9NYA4 1195 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 PDP2Q9P2J9 529 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 ANAPC5Q9UJX4 755 aa14.37□□□□□ -0.11
RPUSD4-201ENST00000298317 KRT36O76013 467 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 BCRP11274 1271 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 GAP43P17677 238 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 GCAP28676 217 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 CD151P48509 253 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 RBM26Q5T8P6 1007 aaKnown RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 SDCCAG8Q86SQ7 713 aaPredicted RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 ZNF398Q8TD17 642 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 GRK7Q8WTQ7 553 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 DMAP1Q9NPF5 467 aaPredicted RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 DMAC2Q9NW81 257 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 SMG5Q9UPR3 1016 aaKnown RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 NUMBLQ9Y6R0 609 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 FAM196BA6NMK8 535 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 GAS8O95995 478 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 CYP1A2P05177 515 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 POLD1P28340 1107 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 TPP2P29144 1249 aaPredicted RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 PSMC4P43686 418 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 AP1B1Q10567 949 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 COG2Q14746 738 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 TRIP13Q15645 432 aaPredicted RBP14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 GSTA3Q16772 222 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 BHMT2Q9H2M3 363 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 NEU2Q9Y3R4 380 aa14.36□□□□□ -0.11
RPUSD4-201ENST00000298317 CAPN9O14815 690 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 TOM1O60784 492 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 CCDC22O60826 627 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 TBX10O75333 385 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 GZMAP12544 262 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 ZRSR2Q15696 482 aaKnown RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 LRRC23Q53EV4 343 aaPredicted RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 BRINP3Q76B58 766 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 OTOAQ7RTW8 1153 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 TDRPQ86YL5 185 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 ATG4AQ8WYN0 398 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 VTI1AQ96AJ9 217 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 C9orf72Q96LT7 481 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 BTBD10Q9BSF8 475 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 PLVAPQ9BX97 442 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 ANO3Q9BYT9 981 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 STX18Q9P2W9 335 aaKnown RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 ZBTB5O15062 677 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 PSMG1O95456 288 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 LDHCP07864 332 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 RRM1P23921 792 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 NMT1P30419 496 aaKnown RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 MTDHQ86UE4 582 aaKnown RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 CCNJLQ8IV13 435 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 KIAA0825Q8IV33 1275 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 CRYGNQ8WXF5 182 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 NCSTNQ92542 709 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 PTCD3Q96EY7 689 aaKnown RBP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 PPP1R12CQ9BZL4 782 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 DCLK3Q9C098 648 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 TRABDQ9H4I3 376 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 KIAA1586Q9HCI6 787 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 FRMD4BQ9Y2L6 1034 aa14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.35□□□□□ -0.11
RPUSD4-201ENST00000298317 SBF2Q86WG5 1849 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L15C9J2P7 530 aa14.34□□□□□ -0.11
RPUSD4-201ENST00000298317 USP17L13C9JLJ4 530 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms