RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GCNT1Q02742 428 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 NBPF20Q3BBV1 942 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 MTMR12Q9C0I1 747 aa24.63■■□□□ 1.53
PTX3-201ENST00000295927 CENPFP49454 3210 aa24.62■■□□□ 1.53
PTX3-201ENST00000295927 B4GALT4O60513 344 aa24.62■■□□□ 1.53
PTX3-201ENST00000295927 DUOXA2Q1HG44 320 aa24.62■■□□□ 1.53
PTX3-201ENST00000295927 NENFQ9UMX5 172 aa24.62■■□□□ 1.53
PTX3-201ENST00000295927 MACROD2A1Z1Q3 448 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 IL18RAPO95256 599 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 NCOA4Q13772 614 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 NAB2Q15742 525 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 C10orf76Q5T2E6 689 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 MAP3K21Q5TCX8 1036 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 SPOPLQ6IQ16 392 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 ALKBH5Q6P6C2 394 aaKnown RBP24.61■■□□□ 1.53
PTX3-201ENST00000295927 ENOSF1Q7L5Y1 443 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 CATSPER4Q7RTX7 472 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 TRAPPC11Q7Z392 1133 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 EFCAB13Q8IY85 973 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 KLHDC9Q8NEP7 349 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 SLC30A5Q8TAD4 765 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 LNX1Q8TBB1 728 aaPredicted RBP24.61■■□□□ 1.53
PTX3-201ENST00000295927 RAET1EQ8TD07 263 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 FAM81BQ96LP2 452 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 GTF2IRD1Q9UHL9 959 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 THSD7BQ9C0I4 1608 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 URI1O94763 535 aaPredicted RBP24.61■■□□□ 1.53
PTX3-201ENST00000295927 EIF4BP23588 611 aaKnown RBP24.61■■□□□ 1.53
PTX3-201ENST00000295927 KYAT1Q16773 422 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 SCARA3Q6AZY7 606 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 GLYCTKQ8IVS8 523 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 NME8Q8N427 588 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 SECISBP2LQ93073 1101 aaKnown RBP24.61■■□□□ 1.53
PTX3-201ENST00000295927 ADPGKQ9BRR6 497 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 L2HGDHQ9H9P8 463 aa24.61■■□□□ 1.53
PTX3-201ENST00000295927 MEFVO15553 781 aaPredicted RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 CST3P01034 146 aaPredicted RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 GNRH1P01148 92 aa24.6■■□□□ 1.53
PTX3-201ENST00000295927 MYCNP04198 464 aaPredicted RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 ASGR1P07306 291 aa24.6■■□□□ 1.53
PTX3-201ENST00000295927 HOXA11P31270 313 aaPredicted RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 TFAMQ00059 246 aaKnown RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 POU5F1Q01860 360 aaKnown RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 NCBP1Q09161 790 aaKnown RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 PCBP1Q15365 356 aaKnown RBP eCLIP24.6■■□□□ 1.53
PTX3-201ENST00000295927 KCNA10Q16322 511 aa24.6■■□□□ 1.53
PTX3-201ENST00000295927 DHX38Q92620 1227 aaKnown RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 PACSIN1Q9BY11 444 aa24.6■■□□□ 1.53
PTX3-201ENST00000295927 APOBEC3GQ9HC16 384 aaKnown RBP24.6■■□□□ 1.53
PTX3-201ENST00000295927 CYP26A1O43174 497 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 SGPL1O95470 568 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 TMEM191BP0C7N4 346 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 SNX17Q15036 470 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 PXYLP1Q8TE99 480 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 U2AF1L4Q8WU68 220 aaKnown RBP24.59■■□□□ 1.53
PTX3-201ENST00000295927 SLC20A1Q8WUM9 679 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 TMEM40Q8WWA1 233 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 ERO1AQ96HE7 468 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 ARID3AQ99856 593 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 AGPAT1Q99943 283 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 CITO14578 2027 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 CTAGE9A4FU28 777 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 LACTBL1A8MY62 500 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 TNFAIP3P21580 790 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 CCSAPQ6IQ19 270 aaPredicted RBP24.59■■□□□ 1.53
PTX3-201ENST00000295927 GDF6Q6KF10 455 aaPredicted RBP24.59■■□□□ 1.53
PTX3-201ENST00000295927 TAF2Q6P1X5 1199 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 SALL4Q9UJQ4 1053 aa24.59■■□□□ 1.53
PTX3-201ENST00000295927 UQCRHLA0A096LP55 91 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 TNNC2P02585 160 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 UQCRHP07919 91 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 CST5P28325 142 aaPredicted RBP24.58■■□□□ 1.53
PTX3-201ENST00000295927 CRYBB1P53674 252 aaPredicted RBP24.58■■□□□ 1.53
PTX3-201ENST00000295927 NOP14P78316 857 aaKnown RBP24.58■■□□□ 1.53
PTX3-201ENST00000295927 DCAF4L1Q3SXM0 396 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 ANKRD36BP1Q96IX9 119 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 DDX20Q9UHI6 824 aaKnown RBP24.58■■□□□ 1.53
PTX3-201ENST00000295927 NUB1Q9Y5A7 615 aa24.58■■□□□ 1.53
PTX3-201ENST00000295927 MYH10P35580 1976 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 FKTNO75072 461 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 CUL2Q13617 745 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 SLC10A6Q3KNW5 377 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 FAM47CQ5HY64 1035 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 DNAAF5Q86Y56 855 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 ZNF710Q8N1W2 664 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 EPS8L1Q8TE68 723 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 NAPGQ99747 312 aaPredicted RBP24.57■■□□□ 1.52
PTX3-201ENST00000295927 MOCS3O95396 460 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 NPTXRO95502 500 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 ASS1P00966 412 aaKnown RBP24.57■■□□□ 1.52
PTX3-201ENST00000295927 SLC27A1Q6PCB7 646 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 SLC47A2Q86VL8 602 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 ZNF296Q8WUU4 475 aaPredicted RBP24.57■■□□□ 1.52
PTX3-201ENST00000295927 ACAP3Q96P50 834 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 IMPG2Q9BZV3 1241 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 ASB7Q9H672 318 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 ACP6Q9NPH0 428 aa24.57■■□□□ 1.52
PTX3-201ENST00000295927 NOCTQ9UK39 431 aaKnown RBP24.57■■□□□ 1.52
PTX3-201ENST00000295927 MROH7Q68CQ1 1323 aa24.56■■□□□ 1.52
PTX3-201ENST00000295927 CLSTN1O94985 981 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms