RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 LAG3P18627 525 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 STX17P56962 302 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 MCCD1P59942 119 aaPredicted RBP14.36□□□□□ -0.11
CCDC42-201ENST00000293845 ERVK-21P61565 698 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 ENPEPQ07075 957 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 CYP24A1Q07973 514 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 PSMD6Q15008 389 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 HABP4Q5JVS0 413 aaKnown RBP14.36□□□□□ -0.11
CCDC42-201ENST00000293845 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 PPP2R2DQ66LE6 453 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 ZNF280BQ86YH2 543 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 RDH13Q8NBN7 331 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 NOC3LQ8WTT2 800 aaKnown RBP14.36□□□□□ -0.11
CCDC42-201ENST00000293845 SLC28A3Q9HAS3 691 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 UBQLN1Q9UMX0 589 aaKnown RBP14.36□□□□□ -0.11
CCDC42-201ENST00000293845 SCN1AP35498 2009 aa14.36□□□□□ -0.11
CCDC42-201ENST00000293845 SYCE3A1L190 88 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 SLC16A3O15427 465 aaKnown RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 XPOTO43592 962 aaKnown RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 NFICP08651 508 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 CCDC192P0DO97 292 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 CYP3A5P20815 502 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 PSMC2P35998 433 aaKnown RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 TMEM132DQ14C87 1099 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 JADE1Q6IE81 842 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 EFCAB13Q8IY85 973 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 CSGALNACT2Q8N6G5 542 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 FAM212AQ96EL1 285 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 BORCS6Q96GS4 357 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 FAM193BQ96PV7 902 aaPredicted RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 TGS1Q96RS0 853 aaKnown RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 GZF1Q9H116 711 aaPredicted RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 PDE11AQ9HCR9 933 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 AAASQ9NRG9 546 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 DNAJB4Q9UDY4 337 aa14.35□□□□□ -0.11
CCDC42-201ENST00000293845 COL4A4P53420 1690 aaPredicted RBP14.35□□□□□ -0.11
CCDC42-201ENST00000293845 ZC3H11AO75152 810 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 GALTP07902 379 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 EPB41P11171 864 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 LRPAP1P30533 357 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 BMPR1AP36894 532 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 BCAR1P56945 870 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 CLDN10P78369 228 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SOX4Q06945 474 aaPredicted RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SPAG1Q07617 926 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SPATA1Q5VX52 437 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 KCNT2Q6UVM3 1135 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 C11orf57Q6ZUT1 292 aaPredicted RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 INTS8Q75QN2 995 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 WDR49Q8IV35 697 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 FAM186BQ8IYM0 893 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 COLGALT1Q8NBJ5 622 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 PLEKHO2Q8TD55 490 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 TMC2Q8TDI7 906 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 PARD3BQ8TEW8 1205 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 UROC1Q96N76 676 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 CGRRF1Q99675 332 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 PLVAPQ9BX97 442 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 ATG2AQ2TAZ0 1938 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 FGFR1OPO95684 399 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 RB1P06400 928 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 PPM1AP35813 382 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SLC11A1P49279 550 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 ALDH7A1P49419 539 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 MARSP56192 900 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 BFSP1Q12934 665 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 EPC2Q52LR7 807 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SPOUT1Q5T280 376 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SPRED2Q7Z698 418 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 USP37Q86T82 979 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 BEST2Q8NFU1 509 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 ENOX1Q8TC92 643 aaKnown RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 C18orf25Q96B23 403 aaPredicted RBP14.34□□□□□ -0.11
CCDC42-201ENST00000293845 EEF2KMTQ96G04 330 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 FNBP1Q96RU3 617 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 C17orf80Q9BSJ5 609 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 DNAJC25Q9H1X3 360 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 TUBGCP4Q9UGJ1 667 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 PCDHB12Q9Y5F1 795 aa14.34□□□□□ -0.11
CCDC42-201ENST00000293845 CHD9Q3L8U1 2897 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 PTPRJQ12913 1337 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 VWA8A3KMH1 1905 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 CASTOR2A6NHX0 329 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 TMEM189-UBE2V1I3L0A0 370 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 NRP1O14786 923 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 GNA14O95837 355 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 ALDH2P05091 517 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 DLATP10515 647 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 RPL9P32969 192 aaKnown RBP14.33□□□□□ -0.12
CCDC42-201ENST00000293845 CTNNB1P35222 781 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 UPP1Q16831 310 aa14.33□□□□□ -0.12
CCDC42-201ENST00000293845 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms